RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 OR11H7Q8NGC8 314 aa11.37□□□□□ -0.59
CDC42BPB-205ENST00000559245 C17orf77Q96MU5 243 aa11.37□□□□□ -0.59
CDC42BPB-205ENST00000559245 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-205ENST00000559245 RSG1Q9BU20 258 aa11.37□□□□□ -0.59
CDC42BPB-205ENST00000559245 SLC25A22Q9H936 323 aa11.37□□□□□ -0.59
CDC42BPB-205ENST00000559245 FABP12A6NFH5 140 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 ATP5G1P05496 136 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 TSPOP30536 169 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 ATP5G3P48201 142 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 B2MP61769 119 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 FCN2Q15485 313 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 OR4C16Q8NGL9 310 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 SMIM4Q8WVI0 70 aa11.36□□□□□ -0.59
CDC42BPB-205ENST00000559245 IGKV1OR2-108A0A075B7D4 117 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 PLAC8L1A1L4L8 177 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 ZNF98A6NK75 572 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 AZU1P20160 251 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 ZNF846Q147U1 533 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 RNF141Q8WVD5 230 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 CCDC32Q9BV29 185 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
CDC42BPB-205ENST00000559245 CBY3A6NI87 242 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 CFDP00746 253 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 RAB11AP62491 216 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 CLINT1Q14677 625 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 OR51S1Q8NGJ8 323 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 OR1S1Q8NH92 325 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 PRRT1Q99946 306 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 SLC45A2Q9UMX9 530 aa11.34□□□□□ -0.59
CDC42BPB-205ENST00000559245 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
CDC42BPB-205ENST00000559245 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
CDC42BPB-205ENST00000559245 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.6
CDC42BPB-205ENST00000559245 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
CDC42BPB-205ENST00000559245 Q9H8V8 135 aa11.33□□□□□ -0.6
CDC42BPB-205ENST00000559245 TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 IAPPP10997 89 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 AKR1C4P17516 323 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 IL18Q14116 193 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 DEDD2Q8WXF8 326 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 GPR82Q96P67 336 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 LINC01587Q99440 93 aa11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 SLC25A39Q9BZJ4 359 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 PAIP2BQ9ULR5 123 aaKnown RBP11.32□□□□□ -0.6
CDC42BPB-205ENST00000559245 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 ORM2P19652 201 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 KRTAP10-2P60368 255 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 FGL1Q08830 312 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 BPIFCQ8NFQ6 507 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 SCGB3A2Q96PL1 93 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 HERC1Q15751 4861 aa11.31□□□□□ -0.6
CDC42BPB-205ENST00000559245 PITX3O75364 302 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 SRPXP78539 464 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 TTC32Q5I0X7 151 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPB-205ENST00000559245 UPK1BO75841 260 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 ANXA3P12429 323 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 IL7P13232 177 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 HTN1P15515 57 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 S100A7P31151 101 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 TAS2R60P59551 318 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 RHOBP62745 196 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 BAK1Q16611 211 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-205ENST00000559245 ANKRD20A5PA0PJZ0 165 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 PYDC2Q56P42 97 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 GNPNAT1Q96EK6 184 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 Q9H3A6 140 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
CDC42BPB-205ENST00000559245 H3BRN7 92 aa11.27□□□□□ -0.61
CDC42BPB-205ENST00000559245 BTF3P20290 206 aaKnown RBP11.27□□□□□ -0.61
CDC42BPB-205ENST00000559245 IFITM3Q01628 133 aa11.27□□□□□ -0.61
CDC42BPB-205ENST00000559245 OR5I1Q13606 314 aa11.27□□□□□ -0.61
CDC42BPB-205ENST00000559245 MCUBQ9NWR8 336 aa11.27□□□□□ -0.61
CDC42BPB-205ENST00000559245 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms