RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GRAMD2BQ96HH9 432 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 TM2D3Q9BRN9 247 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 RSG1Q9BU20 258 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 NRN1Q9NPD7 142 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 A0A1B0GVG6 124 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 HELTA6NFD8 242 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 OR5G3P0C626 314 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 DEFB131AP59861 70 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
SNX1-204ENST00000559061 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 LINC00305Q7Z4B0 112 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
SNX1-204ENST00000559061 ST6GAL2Q96JF0 529 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 PARD6GQ9BYG4 376 aaPredicted RBP8.43□□□□□ -1.06
SNX1-204ENST00000559061 RETNQ9HD89 108 aa8.43□□□□□ -1.06
SNX1-204ENST00000559061 FXYD6-FXYD2A0A087WZ82 144 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 MPDU1O75352 247 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 GIG44P09565 113 aaPredicted RBP8.42□□□□□ -1.06
SNX1-204ENST00000559061 NUP62P37198 522 aaPredicted RBP8.42□□□□□ -1.06
SNX1-204ENST00000559061 PXDC1Q5TGL8 231 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 OR8I2Q8N0Y5 310 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 FAM167A-AS1Q96KT0 104 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 DNAH7Q8WXX0 4024 aa8.42□□□□□ -1.06
SNX1-204ENST00000559061 A0A087X0K7 114 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 DNASE2O00115 360 aaPredicted RBP8.41□□□□□ -1.06
SNX1-204ENST00000559061 SLC17A3O00476 420 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 SNRPCP09234 159 aaKnown RBP8.41□□□□□ -1.06
SNX1-204ENST00000559061 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 HLA-DMBP28068 263 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 CD300CQ08708 224 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 FGL1Q08830 312 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 C10orf113Q5VZT2 155 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 PPP1R14BQ96C90 147 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
SNX1-204ENST00000559061 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 CYTL1Q9NRR1 136 aa8.41□□□□□ -1.06
SNX1-204ENST00000559061 ELOA3CA0A087WX78 387 aaPredicted RBP8.4□□□□□ -1.06
SNX1-204ENST00000559061 H3BQ15 152 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNX1-204ENST00000559061 PRB4P10163 310 aaPredicted RBP8.4□□□□□ -1.06
SNX1-204ENST00000559061 RPL35AP18077 110 aaKnown RBP8.4□□□□□ -1.06
SNX1-204ENST00000559061 AP2S1P53680 142 aaPredicted RBP8.4□□□□□ -1.06
SNX1-204ENST00000559061 PAFAH1B2P68402 229 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 RAB31Q13636 194 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 TRPT1Q86TN4 253 aaKnown RBP8.4□□□□□ -1.06
SNX1-204ENST00000559061 ZNF503Q96F45 646 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 SLC25A2Q9BXI2 301 aa8.4□□□□□ -1.06
SNX1-204ENST00000559061 LOC102724200A0A096LPH7 203 aaPredicted RBP8.39□□□□□ -1.07
SNX1-204ENST00000559061 F6UB75 175 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 H3BTX0 84 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 ARPC5O15511 151 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 CXCL2P19875 107 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 C4BPBP20851 252 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 GALR1P47211 349 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 PSMB3P49720 205 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
SNX1-204ENST00000559061 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 GATAD1Q8WUU5 269 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 SAT2Q96F10 170 aaPredicted RBP8.39□□□□□ -1.07
SNX1-204ENST00000559061 SH3BGRL3Q9H299 93 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
SNX1-204ENST00000559061 hCG_2014768A0A024R1R8 64 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 ISLRO14498 428 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 PYYP10082 97 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 RPL7P18124 248 aaKnown RBP8.38□□□□□ -1.07
SNX1-204ENST00000559061 ATP6V0CP27449 155 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 FFAR4Q5NUL3 377 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 Q6ZRG5 221 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 GPR82Q96P67 336 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 PFDN5Q99471 154 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 PFDN2Q9UHV9 154 aa8.38□□□□□ -1.07
SNX1-204ENST00000559061 A8MTW9 85 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 H3BMM0 161 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 NDUFB4O95168 129 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 NHLRC4P0CG21 123 aaPredicted RBP8.37□□□□□ -1.07
SNX1-204ENST00000559061 RAB2AP61019 212 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 FAM78BQ5VT40 261 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 TCTE3Q8IZS6 198 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 HSD17B11Q8NBQ5 300 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 OR2G3Q8NGZ4 309 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 RCHY1Q96PM5 261 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 OVOL2Q9BRP0 275 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
SNX1-204ENST00000559061 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
SNX1-204ENST00000559061 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 TIMM9Q9Y5J7 89 aa8.37□□□□□ -1.07
SNX1-204ENST00000559061 KIR2DL5BA0A0G2JN68 375 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 KIR2DL5BA0A0G2JPC4 375 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms