RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 TSPOP30536 169 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 HRH1P35367 487 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 AKR1C2P52895 323 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 SPINK13Q1W4C9 94 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 IDNKQ5T6J7 187 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 LPCAT3Q6P1A2 487 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 OR5H2Q8NGV7 314 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 RXFP4Q8TDU9 374 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 GNPNAT1Q96EK6 184 aaPredicted RBP3.72□□□□□ -1.81
LRRC28-208ENST00000558771 ABHD1Q96SE0 405 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 DIABLOQ9NR28 239 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 DOK5Q9P104 306 aa3.72□□□□□ -1.81
LRRC28-208ENST00000558771 MRPS16Q9Y3D3 137 aaKnown RBP3.72□□□□□ -1.81
LRRC28-208ENST00000558771 A0A0G2JRQ6 117 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 ISLRO14498 428 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 PRYO14603 147 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 INSP01308 110 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 PSMB9P28065 219 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 HLA-DMAP28067 261 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 SDC2P34741 201 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 NUP62P37198 522 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-208ENST00000558771 HTR2BP41595 481 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 TAS2R46P59540 309 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 B2MP61769 119 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 TSPAN5P62079 268 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 SUPT4H1P63272 117 aaKnown RBP3.71□□□□□ -1.82
LRRC28-208ENST00000558771 MXD1Q05195 221 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 OR5I1Q13606 314 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 C2orf83Q53S99 150 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 BAP18Q8IXM2 172 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 OR11H7Q8NGC8 314 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 RNASEH2CQ8TDP1 164 aaKnown RBP3.71□□□□□ -1.82
LRRC28-208ENST00000558771 RNF125Q96EQ8 232 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 ACY3Q96HD9 319 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 TP53RKQ96S44 253 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 PBDC1Q9BVG4 233 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 VCXQ9H320 206 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 RPRMQ9NS64 109 aa3.71□□□□□ -1.82
LRRC28-208ENST00000558771 TRAV12-2A0A075B6T6 113 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 A0A087WTM6 91 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF701M0R085 212 aaPredicted RBP3.7□□□□□ -1.82
LRRC28-208ENST00000558771 HTN1P15515 57 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 M6PRP20645 277 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 CNN1P51911 297 aaKnown RBP3.7□□□□□ -1.82
LRRC28-208ENST00000558771 AQP4P55087 323 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 SPCS3P61009 180 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 C1orf194Q5T5A4 169 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 OR8G2PQ6IF36 304 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 ETFRF1Q6IPR1 90 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 TMEM170AQ8WVE7 144 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 C16orf74Q96GX8 76 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 LINC01587Q99440 93 aa3.7□□□□□ -1.82
LRRC28-208ENST00000558771 NOP10Q9NPE3 64 aaKnown RBP3.7□□□□□ -1.82
LRRC28-208ENST00000558771 TIMM8BQ9Y5J9 83 aaPredicted RBP3.7□□□□□ -1.82
LRRC28-208ENST00000558771 C3orf85A0A1B0GTC6 90 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 J3KRW8 73 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 SIVA1O15304 175 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 ATG12O94817 140 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 DUSP14O95147 198 aaKnown RBP3.69□□□□□ -1.82
LRRC28-208ENST00000558771 PGAM2P15259 253 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 PRSS3P35030 304 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 PIGPP57054 158 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 TAS2R60P59551 318 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 RND3P61587 244 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 LYZP61626 148 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 VAMP2P63027 116 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF90Q03938 601 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 TRIM16LQ309B1 348 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 AARDQ4LEZ3 155 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 GPR141Q7Z602 305 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 OR8I2Q8N0Y5 310 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 LINC00612Q8N6U2 182 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 SLC24A4Q8NFF2 622 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 OR10J6PQ8NGY7 276 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 OR52E5Q8NH55 327 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 RNASE8Q8TDE3 154 aaKnown RBP3.69□□□□□ -1.82
LRRC28-208ENST00000558771 PPP1R14BQ96C90 147 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 RRNAD1Q96FB5 475 aaKnown RBP3.69□□□□□ -1.82
LRRC28-208ENST00000558771 S100A16Q96FQ6 103 aaKnown RBP3.69□□□□□ -1.82
LRRC28-208ENST00000558771 SLC25A39Q9BZJ4 359 aaPredicted RBP3.69□□□□□ -1.82
LRRC28-208ENST00000558771 SSR3Q9UNL2 185 aa3.69□□□□□ -1.82
LRRC28-208ENST00000558771 IGKV1D-37A0A075B6S9 117 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 A0A096LPF7 62 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 ZFP92A6NM28 416 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 CEBPZOSA8MTT3 80 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 H3BNG1 76 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 BOLA2-SMG1P6H3BVE0 249 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GAGE7O76087 117 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GAGE12FP0CL80 117 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GAGE12GP0CL81 117 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GAGE12IP0CL82 117 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 UCP1P25874 307 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 RCVRNP35243 200 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GALR1P47211 349 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 MEOX2P50222 304 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 SP6Q3SY56 376 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 NMSQ5H8A3 153 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms