RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 C20orf173Q96LM9 149 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 C2orf50Q96LR7 162 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 SHANK2-AS3Q9BTD1 123 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 GGACTQ9BVM4 153 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 RPRMQ9NS64 109 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 HIGD1AQ9Y241 93 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 LSM5Q9Y4Y9 91 aaKnown RBP12.08□□□□□ -0.48
NEDD4-212ENST00000557845 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
NEDD4-212ENST00000557845 F6UB75 175 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 K7EPK0 472 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 DEDDO75618 318 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 OR5G3P0C626 314 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 FXYD7P58549 80 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 ASAH1Q13510 395 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 EBLN2Q6P2I7 272 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 OR4B1Q8NGF8 309 aa12.07□□□□□ -0.48
NEDD4-212ENST00000557845 A0A0J9YX75 114 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 SLC38A11Q08AI6 406 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 FAM78BQ5VT40 261 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 UHRF2Q96PU4 802 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 C11orf1Q9H5F2 150 aa12.06□□□□□ -0.48
NEDD4-212ENST00000557845 GOSR2O14653 212 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 RPL7P18124 248 aaKnown RBP12.05□□□□□ -0.48
NEDD4-212ENST00000557845 BCAP31P51572 246 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 PSG9Q00887 426 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 FGL1Q08830 312 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 IL15RAQ13261 267 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF705AQ6ZN79 300 aaPredicted RBP12.05□□□□□ -0.48
NEDD4-212ENST00000557845 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF709Q8N972 641 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
NEDD4-212ENST00000557845 TRAV8-2A0A0B4J237 113 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 FAM24AA6NFZ4 105 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 C11orf94C9JXX5 98 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 AGPAT2O15120 278 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 UPK1BO75841 260 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 CAV2P51636 162 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 PXDC1Q5TGL8 231 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 IGFL4Q6B9Z1 124 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 NEU1Q99519 415 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 ARV1Q9H2C2 271 aa12.04□□□□□ -0.48
NEDD4-212ENST00000557845 EPPK1P58107 5090 aaKnown RBP12.04□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
NEDD4-212ENST00000557845 CST7O76096 145 aa12.03□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
NEDD4-212ENST00000557845 PVALBP20472 110 aaPredicted RBP12.03□□□□□ -0.48
NEDD4-212ENST00000557845 ZNF546Q86UE3 836 aa12.03□□□□□ -0.48
NEDD4-212ENST00000557845 IGHV3OR16-12A0A075B7B8 117 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 A8MTW9 85 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 IFITM3Q01628 133 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 RAB32Q13637 225 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 Q6ZTC4 211 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 RNF182Q8N6D2 247 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 MGST2Q99735 147 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 PTTG2Q9NZH5 202 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 CELA1Q9UNI1 258 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
NEDD4-212ENST00000557845 A0A087X0K7 114 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 IGLL5B9A064 214 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 TCTAP57738 103 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 S100A10P60903 97 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 C12orf74Q32Q52 190 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 LINC00305Q7Z4B0 112 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
NEDD4-212ENST00000557845 GPN1Q9HCN4 374 aaPredicted RBP12.01□□□□□ -0.49
NEDD4-212ENST00000557845 LYRM2Q9NU23 88 aaPredicted RBP12.01□□□□□ -0.49
NEDD4-212ENST00000557845 TRAV10A0A0B4J240 114 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 MRPS12O15235 138 aaKnown RBP12□□□□□ -0.49
NEDD4-212ENST00000557845 DUSP14O95147 198 aaKnown RBP12□□□□□ -0.49
NEDD4-212ENST00000557845 S100A11P31949 105 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 CAMLGP49069 296 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 SULT1A1P50225 295 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
NEDD4-212ENST00000557845 RAB31Q13636 194 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 AMTNQ6UX39 209 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 WDR83OSQ9Y284 106 aa12□□□□□ -0.49
NEDD4-212ENST00000557845 IGSF23A1L1A6 192 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 TMEM189A5PLL7 270 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 CXCL3P19876 107 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 VWC2Q2TAL6 325 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 ZNF767PQ75MW2 155 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 ZNF738Q8NE65 137 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 LRRC20Q8TCA0 184 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 UQCC1Q9NVA1 299 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 GOLT1BQ9Y3E0 138 aa11.99□□□□□ -0.49
NEDD4-212ENST00000557845 COX7A2P2O60397 106 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms