RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 H3BRN7 92 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 OR5G3P0C626 314 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 PSMG4Q5JS54 123 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 XP32Q5T750 250 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 PPP1R1CQ8WVI7 109 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 MGST2Q99735 147 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 SHANK2-AS3Q9BTD1 123 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 SLC25A39Q9BZJ4 359 aaPredicted RBP9.21□□□□□ -0.94
SLIRP-211ENST00000557623 ARL6Q9H0F7 186 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 SLC25A32Q9H2D1 315 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 WDR83OSQ9Y284 106 aa9.21□□□□□ -0.94
SLIRP-211ENST00000557623 SPRY2O43597 315 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 MPDU1O75352 247 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 RPL7P18124 248 aaKnown RBP9.2□□□□□ -0.94
SLIRP-211ENST00000557623 CAMLGP49069 296 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 PSMB3P49720 205 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.94
SLIRP-211ENST00000557623 BAXQ07812 192 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 Q6ZRG5 221 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 OVOL2Q9BRP0 275 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 ARV1Q9H2C2 271 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 EDA2RQ9HAV5 297 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 OR5AC2Q9NZP5 309 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 AGRNO00468 2067 aa9.2□□□□□ -0.94
SLIRP-211ENST00000557623 UBE2L5PA0A1B0GUS4 154 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 H0YIZ8 118 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 C3orf84H3BNL1 204 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 ISLRO14498 428 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 MPC2O95563 127 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 SPP1P10451 314 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 NHLH2Q02577 135 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 RGS21Q2M5E4 152 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 DEFB135Q30KP9 77 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 ACTL10Q5JWF8 245 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-211ENST00000557623 TRPT1Q86TN4 253 aaKnown RBP9.19□□□□□ -0.94
SLIRP-211ENST00000557623 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 RNF183Q96D59 192 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 RSG1Q9BU20 258 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 MED28Q9H204 178 aa9.19□□□□□ -0.94
SLIRP-211ENST00000557623 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
SLIRP-211ENST00000557623 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 SOCS3O14543 225 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-211ENST00000557623 ATF4P18848 351 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-211ENST00000557623 FGF7P21781 194 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 RPL29P47914 159 aaKnown RBP9.18□□□□□ -0.94
SLIRP-211ENST00000557623 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 LINC00305Q7Z4B0 112 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 OR5C1Q8NGR4 320 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 LINC00052Q96N35 136 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 PFDN5Q99471 154 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SLIRP-211ENST00000557623 B2MP61769 119 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 NUTF2P61970 127 aaKnown RBP9.17□□□□□ -0.94
SLIRP-211ENST00000557623 OPCMLQ14982 345 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 MIC13Q5XKP0 118 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 DNAJC4Q9NNZ3 241 aa9.17□□□□□ -0.94
SLIRP-211ENST00000557623 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 CXCL3P19876 107 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 SPATA31B1PQ5VZV4 182 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 THAP6Q8TBB0 222 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 ASB13Q8WXK3 278 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 RPRMQ9NS64 109 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 HLA-DRB4X5D2U9 266 aa9.16□□□□□ -0.94
SLIRP-211ENST00000557623 A0A087X0K7 114 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 H3BMM0 161 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 LYL1P12980 280 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 RPL12P30050 165 aaKnown RBP9.15□□□□□ -0.94
SLIRP-211ENST00000557623 FGL1Q08830 312 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 CLINT1Q14677 625 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 FCN2Q15485 313 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 EBLN2Q6P2I7 272 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 OR11H7Q8NGC8 314 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 C1QTNF4Q9BXJ3 329 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 SAV1Q9H4B6 383 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-211ENST00000557623 KCNIP2Q9NS61 270 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 HSPB11Q9Y547 144 aa9.15□□□□□ -0.94
SLIRP-211ENST00000557623 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
SLIRP-211ENST00000557623 CXCL2P19875 107 aa9.14□□□□□ -0.95
SLIRP-211ENST00000557623 OXA1LQ15070 435 aa9.14□□□□□ -0.95
SLIRP-211ENST00000557623 ZNF709Q8N972 641 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms