RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
PSEN1-223ENST00000557511 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
PSEN1-223ENST00000557511 LRRC20Q8TCA0 184 aa6.19□□□□□ -1.42
PSEN1-223ENST00000557511 GLMPQ8WWB7 406 aa6.19□□□□□ -1.42
PSEN1-223ENST00000557511 SEPSECSQ9HD40 501 aaKnown RBP6.19□□□□□ -1.42
PSEN1-223ENST00000557511 DOK5Q9P104 306 aa6.19□□□□□ -1.42
PSEN1-223ENST00000557511 UBE2L5PA0A1B0GUS4 154 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 ZNF98A6NK75 572 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 AGPAT2O15120 278 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 MPDU1O75352 247 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
PSEN1-223ENST00000557511 GATA2P23769 480 aaPredicted RBP6.18□□□□□ -1.42
PSEN1-223ENST00000557511 FGL1Q08830 312 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 LEMD1Q68G75 181 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
PSEN1-223ENST00000557511 ZNF709Q8N972 641 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 OR1L4Q8NGR5 311 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 THAP6Q8TBB0 222 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 PPP1R1CQ8WVI7 109 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 ARL6Q9H0F7 186 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 CSTL1Q9H114 145 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 KCNIP2Q9NS61 270 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 ALG5Q9Y673 324 aa6.18□□□□□ -1.42
PSEN1-223ENST00000557511 IGSF23A1L1A6 192 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 C17orf112F2Z3M2 114 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 IFNA5P01569 189 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 PSMB3P49720 205 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 PLP1P60201 277 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 ARL16Q0P5N6 197 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 IL15RAQ13261 267 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 TMEM41BQ5BJD5 291 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 ACTL10Q5JWF8 245 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 MORN3Q6PF18 240 aaPredicted RBP6.17□□□□□ -1.42
PSEN1-223ENST00000557511 Q6ZWC4 215 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 DCANP1Q8TF63 244 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 PFDN5Q99471 154 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 RSG1Q9BU20 258 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 SLC25A39Q9BZJ4 359 aaPredicted RBP6.17□□□□□ -1.42
PSEN1-223ENST00000557511 ARV1Q9H2C2 271 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
PSEN1-223ENST00000557511 TGP01266 2768 aa6.17□□□□□ -1.42
PSEN1-223ENST00000557511 H3BRN7 92 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 ISLRO14498 428 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 SPRY2O43597 315 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 MPC2O95563 127 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 CA1P00915 261 aaPredicted RBP6.16□□□□□ -1.42
PSEN1-223ENST00000557511 SPP1P10451 314 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 FGF7P21781 194 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 H2BFSP57053 126 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 B2MP61769 119 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
PSEN1-223ENST00000557511 CLINT1Q14677 625 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 C10orf113Q5VZT2 155 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 BPIFA4PQ86YQ2 179 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 OR5C1Q8NGR4 320 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 SCGB1C1Q8TD33 95 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 ASB13Q8WXK3 278 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 SHANK2-AS3Q9BTD1 123 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 SLC25A32Q9H2D1 315 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 OR5AC2Q9NZP5 309 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 WDR83OSQ9Y284 106 aa6.16□□□□□ -1.42
PSEN1-223ENST00000557511 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.42
PSEN1-223ENST00000557511 RPL29P47914 159 aaKnown RBP6.15□□□□□ -1.42
PSEN1-223ENST00000557511 LINC00310P59036 64 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 NHLH2Q02577 135 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 VWC2Q2TAL6 325 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 SPATA31B1PQ5VZV4 182 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 TMEM182Q6ZP80 229 aaPredicted RBP6.15□□□□□ -1.42
PSEN1-223ENST00000557511 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 FAM24BQ8N5W8 94 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 MGST2Q99735 147 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 SCRT1Q9BWW7 348 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 C11orf1Q9H5F2 150 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 RETNQ9HD89 108 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 DNAJC4Q9NNZ3 241 aa6.15□□□□□ -1.42
PSEN1-223ENST00000557511 DUSP14O95147 198 aaKnown RBP6.14□□□□□ -1.43
PSEN1-223ENST00000557511 LYL1P12980 280 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 MIC13Q5XKP0 118 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 FOXI2Q6ZQN5 318 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 MUC7Q8TAX7 377 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 RNF183Q96D59 192 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 ATP5SQ99766 215 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 RARRES2Q99969 163 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 SLC39A9Q9NUM3 307 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 PPP1R14DQ9NXH3 145 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms