RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
TUBB3-214ENST00000557490 H3BRN7 92 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-214ENST00000557490 CAMLGP49069 296 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 PSMB3P49720 205 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 MEOX2P50222 304 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 PPP1R1CQ8WVI7 109 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 RNF24Q9Y225 148 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 ALG5Q9Y673 324 aa11.66□□□□□ -0.54
TUBB3-214ENST00000557490 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 PET100P0DJ07 73 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 BAXQ07812 192 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 VWC2Q2TAL6 325 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-214ENST00000557490 TRPT1Q86TN4 253 aaKnown RBP11.65□□□□□ -0.54
TUBB3-214ENST00000557490 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
TUBB3-214ENST00000557490 ISLRO14498 428 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 SOCS3O14543 225 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 COX7A2P2O60397 106 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 SPP1P10451 314 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
TUBB3-214ENST00000557490 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
TUBB3-214ENST00000557490 EWSR1Q01844 656 aaKnown RBP eCLIP11.64□□□□□ -0.55
TUBB3-214ENST00000557490 Q6ZRG5 221 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 GATAD1Q8WUU5 269 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 C16orf92Q96LL3 132 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 ARV1Q9H2C2 271 aa11.64□□□□□ -0.55
TUBB3-214ENST00000557490 H0YIZ8 118 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 FGF7P21781 194 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 NHLH2Q02577 135 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 TMEM41BQ5BJD5 291 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 IL17DQ8TAD2 202 aa11.63□□□□□ -0.55
TUBB3-214ENST00000557490 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
TUBB3-214ENST00000557490 MPC2O95563 127 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 FGL1Q08830 312 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 MIC13Q5XKP0 118 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 LINC00305Q7Z4B0 112 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 MED28Q9H204 178 aa11.62□□□□□ -0.55
TUBB3-214ENST00000557490 H3BMM0 161 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 MPDU1O75352 247 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 RPL29P47914 159 aaKnown RBP11.61□□□□□ -0.55
TUBB3-214ENST00000557490 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
TUBB3-214ENST00000557490 PRR20EP86478 221 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 PRR20CP86479 221 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 PRR20DP86480 221 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 PRR20BP86481 221 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 PRR20AP86496 221 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 OPCMLQ14982 345 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 RARRES2Q99969 163 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 DNAJC4Q9NNZ3 241 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 RPRMQ9NS64 109 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
TUBB3-214ENST00000557490 FRAS1Q86XX4 4008 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 A0A0J9YWU9 116 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 B2MP61769 119 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 CLINT1Q14677 625 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 RGS21Q2M5E4 152 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 OR11H2Q8NH07 326 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 CHAC2Q8WUX2 184 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 TMEM37Q8WXS4 190 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 PFDN5Q99471 154 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 SAV1Q9H4B6 383 aaPredicted RBP11.6□□□□□ -0.55
TUBB3-214ENST00000557490 SLC39A9Q9NUM3 307 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
TUBB3-214ENST00000557490 GIG44P09565 113 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-214ENST00000557490 CXCL3P19876 107 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 C4BPBP20851 252 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 LRRC20Q8TCA0 184 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 MBD2Q9UBB5 411 aa11.59□□□□□ -0.55
TUBB3-214ENST00000557490 A0A087X0K7 114 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 DEFB1P60022 68 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 FCN2Q15485 313 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 BPIFA4PQ86YQ2 179 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 NPCDR1Q9BY65 106 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 HSPB11Q9Y547 144 aa11.58□□□□□ -0.56
TUBB3-214ENST00000557490 IGKV3-20P01619 116 aa11.57□□□□□ -0.56
TUBB3-214ENST00000557490 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
TUBB3-214ENST00000557490 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms