RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RETNQ9HD89 108 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 HUWE1Q7Z6Z7 4374 aaKnown RBP7.86□□□□□ -1.15
LINC00239-201ENST00000556973 UBE2L5PA0A1B0GUS4 154 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 ISLRO14498 428 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 SOCS3O14543 225 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 LYL1P12980 280 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 RPL7P18124 248 aaKnown RBP7.86□□□□□ -1.15
LINC00239-201ENST00000556973 PSMB3P49720 205 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 OXA1LQ15070 435 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 ACTL10Q5JWF8 245 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 C10orf113Q5VZT2 155 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 MORN3Q6PF18 240 aaPredicted RBP7.86□□□□□ -1.15
LINC00239-201ENST00000556973 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 OR11H7Q8NGC8 314 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 OR1L4Q8NGR5 311 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 THAP6Q8TBB0 222 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 TMEM37Q8WXS4 190 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 RNF183Q96D59 192 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 LINC00052Q96N35 136 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 UHRF2Q96PU4 802 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
LINC00239-201ENST00000556973 KNCNA6PVL3 124 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 SPP1P10451 314 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
LINC00239-201ENST00000556973 FGF7P21781 194 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 RPL12P30050 165 aaKnown RBP7.85□□□□□ -1.15
LINC00239-201ENST00000556973 FGL1Q08830 312 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 OPCMLQ14982 345 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 FCN2Q15485 313 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 DEFB135Q30KP9 77 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 TMEM41BQ5BJD5 291 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 MIC13Q5XKP0 118 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 TRPT1Q86TN4 253 aaKnown RBP7.85□□□□□ -1.15
LINC00239-201ENST00000556973 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 PFDN5Q99471 154 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 SLC39A9Q9NUM3 307 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 MBD2Q9UBB5 411 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 HSPB11Q9Y547 144 aa7.85□□□□□ -1.15
LINC00239-201ENST00000556973 H3BMM0 161 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 C3orf84H3BNL1 204 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 CA1P00915 261 aaPredicted RBP7.84□□□□□ -1.15
LINC00239-201ENST00000556973 B2MP61769 119 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 NUTF2P61970 127 aaKnown RBP7.84□□□□□ -1.15
LINC00239-201ENST00000556973 CLINT1Q14677 625 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 SPATA31B1PQ5VZV4 182 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 BPIFA4PQ86YQ2 179 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 GATAD1Q8WUU5 269 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 NPCDR1Q9BY65 106 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 WDR61Q9GZS3 305 aaKnown RBP7.84□□□□□ -1.15
LINC00239-201ENST00000556973 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
LINC00239-201ENST00000556973 RPRMQ9NS64 109 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 PXMP4Q9Y6I8 212 aa7.84□□□□□ -1.15
LINC00239-201ENST00000556973 A0A087X0K7 114 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 C17orf112F2Z3M2 114 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 HLA-DRB4P13762 266 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF709Q8N972 641 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 MUC7Q8TAX7 377 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 LRRC20Q8TCA0 184 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 ATP5SQ99766 215 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 HLA-DRB4X5D2U9 266 aa7.83□□□□□ -1.16
LINC00239-201ENST00000556973 MRPS12O15235 138 aaKnown RBP7.82□□□□□ -1.16
LINC00239-201ENST00000556973 IFNA5P01569 189 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 GIPP09681 153 aaPredicted RBP7.82□□□□□ -1.16
LINC00239-201ENST00000556973 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 RARRES2Q99969 163 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 KCNIP2Q9NS61 270 aa7.82□□□□□ -1.16
LINC00239-201ENST00000556973 TRAV8-2A0A0B4J237 113 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 TRAV5A0A0B4J249 113 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 GIG44P09565 113 aaPredicted RBP7.81□□□□□ -1.16
LINC00239-201ENST00000556973 CXCL2P19875 107 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 GUK1Q16774 197 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 GDF5OSQ5U4N7 250 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 C20orf173Q96LM9 149 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 C1QTNF4Q9BXJ3 329 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 PARD6GQ9BYG4 376 aaPredicted RBP7.81□□□□□ -1.16
LINC00239-201ENST00000556973 AGRNO00468 2067 aa7.81□□□□□ -1.16
LINC00239-201ENST00000556973 A0A0J9YX75 114 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 PSG3Q16557 428 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 IGFL4Q6B9Z1 124 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 OR4B1Q8NGF8 309 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 OR11H2Q8NH07 326 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 SLC50A1Q9BRV3 221 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 HRH4Q9H3N8 390 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
LINC00239-201ENST00000556973 A0A0J9YWU9 116 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 F6UB75 175 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 DUSP14O95147 198 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms