RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 FAM122CQ6P4D5 195 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 MIR17HGQ75NE6 70 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 OR11H1Q8NG94 326 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 OR1B1Q8NGR6 318 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 OR1N2Q8NGR9 330 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 MRAPQ8TCY5 172 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 TMEM37Q8WXS4 190 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 TRGV9Q99603 122 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 PBDC1Q9BVG4 233 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-244ENST00000556898 RPRMQ9NS64 109 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
ATXN3-244ENST00000556898 PUS1Q9Y606 427 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATXN3-244ENST00000556898 TRAV30A0A087WSZ9 112 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 WI2-2373I1.2A0A1W2PRP0 233 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF320A2RRD8 509 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 PRSS29PA6NIE9 313 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 C17orf112F2Z3M2 114 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 TEX46H3BTG2 121 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 NUPL2O15504 423 aaKnown RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 GGCTO75223 188 aaKnown RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 PRB2P02812 416 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 IL4P05112 153 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 OR5G3P0C626 314 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 RD3LP0DJH9 198 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 PRB4P10163 310 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 HOXD3P31249 432 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 FCGR2BP31994 310 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 RPL29P47914 159 aaKnown RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 YPEL3P61236 119 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF616Q08AN1 781 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 TEX261Q6UWH6 196 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF600Q6ZNG1 722 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 COMMD1Q8N668 190 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF709Q8N972 641 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 OR10G4Q8NGN3 311 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 OR10G9Q8NGN4 311 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 OR10G7Q8NGN6 311 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 Q8WTZ3 238 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 C4orf3Q8WVX3 66 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 RNF125Q96EQ8 232 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 TXN2Q99757 166 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 PSMG3Q9BT73 122 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 C20orf24Q9BUV8 137 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 SCRT1Q9BWW7 348 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 SLC25A22Q9H936 323 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 TIMM9Q9Y5J7 89 aa4.03□□□□□ -1.76
ATXN3-244ENST00000556898 TSSC4Q9Y5U2 329 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-244ENST00000556898 LINC01619G3V211 115 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 H3BTX0 84 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 COX7A2P2O60397 106 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 MPDU1O75352 247 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 SEC11BP0C7V7 166 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 C4BPBP20851 252 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 FGF8P55075 233 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-244ENST00000556898 SYNJ2BPP57105 145 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 CCL20P78556 96 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 RAB31Q13636 194 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 RPEL1Q2QD12 228 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 AKR1C8PQ5T2L2 129 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 FAM78BQ5VT40 261 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 LCN15Q6UWW0 184 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 ADAMTSL5Q6ZMM2 481 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 Q6ZRG5 221 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 RPP25LQ8N5L8 163 aaKnown RBP4.02□□□□□ -1.77
ATXN3-244ENST00000556898 FAM213BQ8TBF2 198 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 TMEM190Q8WZ59 177 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 DPF1Q92782 380 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 DLX4Q92988 240 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-244ENST00000556898 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-244ENST00000556898 C1orf43Q9BWL3 253 aa4.02□□□□□ -1.77
ATXN3-244ENST00000556898 MRPL27Q9P0M9 148 aaKnown RBP4.02□□□□□ -1.77
ATXN3-244ENST00000556898 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 TMEM213A2RRL7 107 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 ZNF705EA8MWA4 302 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-244ENST00000556898 H3BRN7 92 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 CCL24O00175 119 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 NDUFA4O00483 81 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 HYPMO75409 117 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 PYYP10082 97 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 M6PRP20645 277 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 SULT1A2P50226 295 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 PLP1P60201 277 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 SELENOTP62341 195 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 EIF5AP63241 154 aaKnown RBP4.01□□□□□ -1.77
ATXN3-244ENST00000556898 RELQ04864 619 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-244ENST00000556898 FHL3Q13643 280 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 KLF5Q13887 457 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-244ENST00000556898 ACOT6Q3I5F7 207 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-244ENST00000556898 FAM209BQ5JX69 171 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 C10orf113Q5VZT2 155 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 SPSB3Q6PJ21 355 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
ATXN3-244ENST00000556898 GPHB5Q86YW7 130 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms