RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 OR13C6PQ8NH95 151 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 ZHX1-C8orf76Q96EF9 292 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 LINC00526Q96FQ7 95 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 ATPIF1Q9UII2 106 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 OR52A1Q9UKL2 312 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 C22orf24Q9Y442 160 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 KDM6AO15550 1401 aaPredicted RBP0.77□□□□□ -2.29
SCFD1-217ENST00000555953 ARHGEF11O15085 1522 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 ADGBQ8N7X0 1667 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 DOCK4Q8N1I0 1966 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 SCN8AQ9UQD0 1980 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 CEP164Q9UPV0 1460 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 A0A1W2PRE2 83 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 A8MWV9 139 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 ZNF736B4DX44 427 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-217ENST00000555953 INE1O15225 51 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 IGLV1-51P01701 117 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 TRGC2P03986 189 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 IDO1P14902 403 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 RPL7P18124 248 aaKnown RBP0.76□□□□□ -2.29
SCFD1-217ENST00000555953 ZNF93P35789 620 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-217ENST00000555953 ARPP19P56211 112 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 AKR1C8PQ5T2L2 129 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 TMEM78Q5T7P6 136 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 FKBP1CQ5VVH2 108 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 PATE2Q6UY27 113 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 GRINAQ7Z429 371 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 GRPEL2Q8TAA5 225 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 CANT1Q8WVQ1 401 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 OBSCN-AS1Q96MR7 158 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 C6orf62Q9GZU0 229 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-217ENST00000555953 SH3BGRL3Q9H299 93 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 BOLA2Q9H3K6 86 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 OTORQ9NRC9 128 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 LYRM2Q9NU23 88 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-217ENST00000555953 SSR3Q9UNL2 185 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 NDUFAF1Q9Y375 327 aa0.76□□□□□ -2.29
SCFD1-217ENST00000555953 SYNMO15061 1565 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 CAMSAP2Q08AD1 1489 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 UHRF1BP1Q6BDS2 1440 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 MAP1LC3B2A6NCE7 125 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 RIIAD1A6NNX1 92 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 NDUFC2O95298 119 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 DHFRP00374 187 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 DYNLT3P51808 116 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 TMBIM6P55061 237 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 ROMO1P60602 79 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 MYL5Q02045 173 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 DCUN1D2Q6PH85 259 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 FAM19A2Q8N3H0 131 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 STX19Q8N4C7 294 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 Q8N814 137 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 TMEM254Q8TBM7 123 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 DYDC1Q8WWB3 177 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 SLC25A21Q9BQT8 299 aaPredicted RBP0.75□□□□□ -2.29
SCFD1-217ENST00000555953 MAP1LC3BQ9GZQ8 125 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 ALPK3Q96L96 1907 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 MYH2Q9UKX2 1941 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 E9PCH4 1651 aa0.75□□□□□ -2.29
SCFD1-217ENST00000555953 NISCHQ9Y2I1 1504 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 TECPR2O15040 1411 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 LOC105371267A0A1B0GV96 52 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 DUXBA0A1W2PPF3 345 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 CCDC160A6NGH7 325 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 PPP5D1E7EU14 171 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 AIPO00170 330 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 CNBPP62633 177 aaKnown RBP0.74□□□□□ -2.29
SCFD1-217ENST00000555953 MPV17LQ2QL34 196 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 C1orf134Q5TEV5 83 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 GDF5OSQ5U4N7 250 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 CLECL1Q8IZS7 167 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 FAM24BQ8N5W8 94 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 PATE1Q8WXA2 126 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 BORCS8Q96FH0 119 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 TEX37Q96LM6 180 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 GPER1Q99527 375 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 PBDC1Q9BVG4 233 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 NPCDR1Q9BY65 106 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 OR2J1Q9GZK6 312 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 BIN3Q9NQY0 253 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 MED11Q9P086 117 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 ZFP30Q9Y2G7 519 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 KIAA1549Q9HCM3 1950 aa0.74□□□□□ -2.29
SCFD1-217ENST00000555953 CD109Q6YHK3 1445 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 LAMB4A4D0S4 1761 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 N4BP2Q86UW6 1770 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-217ENST00000555953 ANKRD30AQ9BXX3 1397 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 NCOA6Q14686 2063 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-217ENST00000555953 IFNA21P01568 189 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 NBEAP1P0C6P0 100 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 RPS3P23396 243 aaKnown RBP eCLIP0.73□□□□□ -2.29
SCFD1-217ENST00000555953 DR1Q01658 176 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 SCGB2B2Q4G0G5 96 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 TEX261Q6UWH6 196 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 C2orf82Q6UX34 121 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 C4orf22Q6V702 233 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 TAC4Q86UU9 113 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 Q8TAT8 98 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 PLEKHB2Q96CS7 222 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms