RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 MEOX2P50222 304 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 HBG1P69891 147 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 HBG2P69892 147 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 EWSR1Q01844 656 aaKnown RBP eCLIP10.02□□□□□ -0.81
SHMT2-219ENST00000555563 PXDC1Q5TGL8 231 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-219ENST00000555563 PATE2Q6UY27 113 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 E5RGE8 158 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 RPL7P18124 248 aaKnown RBP10.01□□□□□ -0.81
SHMT2-219ENST00000555563 S100A11P31949 105 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 CYCSP99999 105 aaKnown RBP10.01□□□□□ -0.81
SHMT2-219ENST00000555563 OR11H2Q8NH07 326 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 IL17DQ8TAD2 202 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 PPP1R1CQ8WVI7 109 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 RARRES2Q99969 163 aa10.01□□□□□ -0.81
SHMT2-219ENST00000555563 COX7A2P2O60397 106 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 RLN2P04090 185 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 ATF4P18848 351 aaPredicted RBP10□□□□□ -0.81
SHMT2-219ENST00000555563 PRR20EP86478 221 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 PRR20CP86479 221 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 PRR20DP86480 221 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 PRR20BP86481 221 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 PRR20AP86496 221 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 BAXQ07812 192 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 RAB31Q13636 194 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 MIC13Q5XKP0 118 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 FOXI2Q6ZQN5 318 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 S100A7AQ86SG5 101 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 SAV1Q9H4B6 383 aaPredicted RBP10□□□□□ -0.81
SHMT2-219ENST00000555563 ALG5Q9Y673 324 aa10□□□□□ -0.81
SHMT2-219ENST00000555563 F6UB75 175 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 FGF7P21781 194 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 NHLH2Q02577 135 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 FGL1Q08830 312 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 OPCMLQ14982 345 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 LINC00305Q7Z4B0 112 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 TMEM37Q8WXS4 190 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 SLC25A31Q9H0C2 315 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 CLEC5AQ9NY25 188 aa9.99□□□□□ -0.81
SHMT2-219ENST00000555563 A0A087X0K7 114 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 TRAV8-2A0A0B4J237 113 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
SHMT2-219ENST00000555563 MPC2O95563 127 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
SHMT2-219ENST00000555563 ATP6V1FQ16864 119 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 C10orf113Q5VZT2 155 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 CSNK1G2-AS1Q8NCQ2 148 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 THAP6Q8TBB0 222 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
SHMT2-219ENST00000555563 RPRMQ9NS64 109 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 RNF24Q9Y225 148 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 RYR2Q92736 4967 aa9.98□□□□□ -0.81
SHMT2-219ENST00000555563 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-219ENST00000555563 A0A0J9YX75 114 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 DEFB4AO15263 64 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 PET100P0DJ07 73 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 RPL29P47914 159 aaKnown RBP9.97□□□□□ -0.81
SHMT2-219ENST00000555563 B2MP61769 119 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 PMS2P11Q13670 270 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 CLINT1Q14677 625 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 Q6ZRG5 221 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 Q8NAQ8 132 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 OR4B1Q8NGF8 309 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 CHAC2Q8WUX2 184 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 RNF126Q9BV68 326 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 SLC39A9Q9NUM3 307 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 PXMP4Q9Y6I8 212 aa9.97□□□□□ -0.81
SHMT2-219ENST00000555563 SACSQ9NZJ4 4579 aa9.96□□□□□ -0.81
SHMT2-219ENST00000555563 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-219ENST00000555563 MPDU1O75352 247 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 CXCL3P19876 107 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 FXYD7P58549 80 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 FAM78BQ5VT40 261 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 EBLN2Q6P2I7 272 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 NPCDR1Q9BY65 106 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 DNAJC4Q9NNZ3 241 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 MBD2Q9UBB5 411 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 X6R8D5 127 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.82
SHMT2-219ENST00000555563 IGHV4-28A0A0C4DH34 117 aa9.95□□□□□ -0.82
SHMT2-219ENST00000555563 CXorf65A6NEN9 183 aa9.95□□□□□ -0.82
SHMT2-219ENST00000555563 SNRPCP09234 159 aaKnown RBP9.95□□□□□ -0.82
SHMT2-219ENST00000555563 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms