RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 HIGD1AQ9Y241 93 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 ELOA3CA0A087WX78 387 aaPredicted RBP8.54□□□□□ -1.04
VRK1-204ENST00000555351 TRAV10A0A0B4J240 114 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 AMBPP02760 352 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 LINC00869P0C866 280 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 GATA2P23769 480 aaPredicted RBP8.54□□□□□ -1.04
VRK1-204ENST00000555351 PSG9Q00887 426 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 MZT2BQ6NZ67 158 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 C12orf45Q8N5I9 185 aaPredicted RBP8.54□□□□□ -1.04
VRK1-204ENST00000555351 ZNF709Q8N972 641 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 C17orf77Q96MU5 243 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 SLC25A22Q9H936 323 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 DOK5Q9P104 306 aa8.54□□□□□ -1.04
VRK1-204ENST00000555351 TRAV6A0A075B6T7 132 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 A0A087X0K7 114 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 FAM240BA0A1B0GVZ2 78 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 L7N2F9 121 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 DUSP14O95147 198 aaKnown RBP8.53□□□□□ -1.04
VRK1-204ENST00000555351 HLA-DMBP28068 263 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 VAMP2P63027 116 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 ASAH1Q13510 395 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 C2orf50Q96LR7 162 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 SCRT1Q9BWW7 348 aa8.53□□□□□ -1.04
VRK1-204ENST00000555351 PLECQ15149 4684 aaKnown RBP8.52□□□□□ -1.05
VRK1-204ENST00000555351 GOSR2O14653 212 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 CCNKO75909 580 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 CXCL2P19875 107 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 PVALBP20472 110 aaPredicted RBP8.52□□□□□ -1.05
VRK1-204ENST00000555351 RRAS2P62070 204 aaPredicted RBP8.52□□□□□ -1.05
VRK1-204ENST00000555351 IL15RAQ13261 267 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 RAB31Q13636 194 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 RNF126Q9BV68 326 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 C11orf1Q9H5F2 150 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 GOLT1BQ9Y3E0 138 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 RFNGQ9Y644 331 aa8.52□□□□□ -1.05
VRK1-204ENST00000555351 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 CCSO14618 274 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 AGPAT2O15120 278 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 OR5G3P0C626 314 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 SPART-AS1P0CW21 52 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 B2MP61769 119 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 ARL16Q0P5N6 197 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 AMTNQ6UX39 209 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 GSG1LQ6UXU4 331 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 PATE2Q6UY27 113 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 Q6ZTC4 211 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 CHAC2Q8WUX2 184 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 SEC22CQ9BRL7 303 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 ARL6Q9H0F7 186 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 ARV1Q9H2C2 271 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
VRK1-204ENST00000555351 TRAV8-2A0A0B4J237 113 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 A6NHS1 94 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 FAM25EA8MYX2 175 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 F6UB75 175 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 S100A11P31949 105 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 DEFB1P60022 68 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 SLC38A11Q08AI6 406 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 OXA1LQ15070 435 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 VWC2Q2TAL6 325 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 C12orf74Q32Q52 190 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 FAM210BQ96KR6 192 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 IGF2BP2-AS1Q96M15 143 aa8.5□□□□□ -1.05
VRK1-204ENST00000555351 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
VRK1-204ENST00000555351 IGLL5B9A064 214 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 MRPS12O15235 138 aaKnown RBP8.49□□□□□ -1.05
VRK1-204ENST00000555351 UPK1BO75841 260 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 HBE1P02100 147 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 CAMLGP49069 296 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 SULT1A1P50225 295 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 CAV2P51636 162 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 CNN1P51911 297 aaKnown RBP8.49□□□□□ -1.05
VRK1-204ENST00000555351 HBG1P69891 147 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 HBG2P69892 147 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 PSG3Q16557 428 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 ATP6V1FQ16864 119 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 LINC00305Q7Z4B0 112 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 BPIFA4PQ86YQ2 179 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 UHRF2Q96PU4 802 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 MGST2Q99735 147 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 GPN1Q9HCN4 374 aaPredicted RBP8.49□□□□□ -1.05
VRK1-204ENST00000555351 UQCC1Q9NVA1 299 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 PTTG2Q9NZH5 202 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
VRK1-204ENST00000555351 WDR83OSQ9Y284 106 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms