RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 C10orf55Q5SWW7 151 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 WDR73Q6P4I2 378 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 OR4X1Q8NH49 305 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 PAXXQ9BUH6 204 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 ZNF355PQ9NSJ1 428 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 DPM3Q9P2X0 92 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 STAB2Q8WWQ8 2551 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 TRBV20OR9-2A0A075B6H5 130 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 WI2-2373I1.2A0A1W2PRP0 233 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 PCP4L1A6NKN8 68 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 CGB1A6NKQ9 187 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 S100A7P31151 101 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 LGALS4P56470 323 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 MINOS1Q5TGZ0 78 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 OR5T1Q8NG75 326 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
SHMT2-216ENST00000554975 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 MISP3Q96FF7 219 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
SHMT2-216ENST00000554975 ELOVL1Q9BW60 279 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 VPREB3Q9UKI3 123 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 MINOS1-NBL1R4GNA1 71 aa8.72□□□□□ -1.01
SHMT2-216ENST00000554975 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 ODF3BA8MYP8 253 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 ISLRO14498 428 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 PHOX2AO14813 284 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 NBR2O15453 112 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 ZNF90Q03938 601 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 KLHDC1Q8N7A1 406 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 FAM167A-AS1Q96KT0 104 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 FNDC4Q9H6D8 234 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-216ENST00000554975 TPSG1Q9NRR2 321 aa8.71□□□□□ -1.02
SHMT2-216ENST00000554975 IGHV3-72A0A0B4J1Y9 119 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 XKRY2A2RUG3 117 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 GGTLC3B5MD39 225 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 LY6LH3BQJ8 138 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 HYPMO75409 117 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 NDUFA3O95167 84 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 MOSP00540 346 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 IGLL1P15814 213 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 ERVFC1-1P60608 527 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 YPEL3P61236 119 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-216ENST00000554975 DIAPH2-AS1Q14236 149 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 MMDQ15546 238 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 HCP5Q6MZN7 132 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 OR5R1Q8NH85 324 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 OR2T6Q8NHC8 308 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 OCC1Q8TAD7 63 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 TMEM37Q8WXS4 190 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 PACRGQ96M98 296 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-216ENST00000554975 LYSTQ99698 3801 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 TBL2Q9Y4P3 447 aaKnown RBP8.7□□□□□ -1.02
SHMT2-216ENST00000554975 DMRT1Q9Y5R6 373 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
SHMT2-216ENST00000554975 DNAH1Q9P2D7 4330 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 IGKV1D-37A0A075B6S9 117 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 TRAV30A0A087WSZ9 112 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 TEX22C9J3V5 150 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 PEX7O00628 323 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 GCGP01275 180 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 HIST1H1BP16401 226 aaKnown RBP8.69□□□□□ -1.02
SHMT2-216ENST00000554975 CRYBB3P26998 211 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 KRTAP10-11P60412 298 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 UBE2G1P62253 170 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 LY6EQ16553 131 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 DEFB121Q5J5C9 76 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 NPBQ8NG41 125 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 IGF2BP2-AS1Q96M15 143 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 TMEM14CQ9P0S9 112 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 HIGD1AQ9Y241 93 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
SHMT2-216ENST00000554975 H3BUX3 64 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 CNIH1O95406 144 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 HLA-DQA1P01909 254 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 CD28P10747 220 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-216ENST00000554975 SUMO1P63165 101 aaKnown RBP8.68□□□□□ -1.02
SHMT2-216ENST00000554975 MRGPRG-AS1Q2M3A8 158 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 LINC00305Q7Z4B0 112 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 GPR61Q9BZJ8 451 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 FBXL15Q9H469 300 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 THYN1Q9P016 225 aa8.68□□□□□ -1.02
SHMT2-216ENST00000554975 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
SHMT2-216ENST00000554975 E7EUB6 86 aa8.67□□□□□ -1.02
SHMT2-216ENST00000554975 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
SHMT2-216ENST00000554975 FABP4P15090 132 aa8.67□□□□□ -1.02
SHMT2-216ENST00000554975 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms