RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 OVOL2Q9BRP0 275 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 MED28Q9H204 178 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 ARV1Q9H2C2 271 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 STARD9Q9P2P6 4700 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-214ENST00000554928 NUP62P37198 522 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-214ENST00000554928 AP2S1P53680 142 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-214ENST00000554928 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 GDF5OSQ5U4N7 250 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 WWC2-AS2Q96NR7 200 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 RSG1Q9BU20 258 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 EDA2RQ9HAV5 297 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 WFDC1Q9HC57 220 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 HSPB11Q9Y547 144 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
SYNE2-214ENST00000554928 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 TRAV5A0A0B4J249 113 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
SYNE2-214ENST00000554928 LYL1P12980 280 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-214ENST00000554928 RAP2BP61225 183 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 HBG1P69891 147 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 HBG2P69892 147 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 ATP6V1FQ16864 119 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 TRPT1Q86TN4 253 aaKnown RBP9.06□□□□□ -0.96
SYNE2-214ENST00000554928 LINC00052Q96N35 136 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 SLC25A31Q9H0C2 315 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 FBXL17Q9UF56 701 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
SYNE2-214ENST00000554928 KMT2CQ8NEZ4 4911 aaKnown RBP9.05□□□□□ -0.96
SYNE2-214ENST00000554928 AGRNO00468 2067 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 F6UB75 175 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 H3BTX0 84 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 COX7A2P2O60397 106 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 C4BPBP20851 252 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 RPL12P30050 165 aaKnown RBP9.05□□□□□ -0.96
SYNE2-214ENST00000554928 APOC4P55056 127 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 B2MP61769 119 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 NPCDR1Q9BY65 106 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 CSTL1Q9H114 145 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 SLC39A9Q9NUM3 307 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
SYNE2-214ENST00000554928 KIR2DL5BA0A0G2JN68 375 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 KIR2DL5BA0A0G2JPC4 375 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 G3V3Q6 166 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 GALR1P47211 349 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 RPL29P47914 159 aaKnown RBP9.04□□□□□ -0.96
SYNE2-214ENST00000554928 FGL1Q08830 312 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 SPATA31B1PQ5VZV4 182 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 STHQ8IWL8 128 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 KIR2DL5AQ8N109 375 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 RNF182Q8N6D2 247 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 KIR2DL5BQ8NHK3 375 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
SYNE2-214ENST00000554928 WDR61Q9GZS3 305 aaKnown RBP9.04□□□□□ -0.96
SYNE2-214ENST00000554928 H3BMM0 161 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 SPRY2O43597 315 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-214ENST00000554928 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-214ENST00000554928 PET100P0DJ07 73 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 PSMB3P49720 205 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
SYNE2-214ENST00000554928 RAB31Q13636 194 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 PXDC1Q5TGL8 231 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 Q6ZWC4 215 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 ATP5SQ99766 215 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
SYNE2-214ENST00000554928 DNAJC4Q9NNZ3 241 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 CLEC5AQ9NY25 188 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 SACSQ9NZJ4 4579 aa9.03□□□□□ -0.96
SYNE2-214ENST00000554928 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.97
SYNE2-214ENST00000554928 A0A087X0K7 114 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 H3BQ15 152 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 SMLR1H3BR10 107 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 SLC17A3O00476 420 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 ISLRO14498 428 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 EIF3GO75821 320 aaKnown RBP eCLIP9.02□□□□□ -0.97
SYNE2-214ENST00000554928 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 RPL7P18124 248 aaKnown RBP9.02□□□□□ -0.97
SYNE2-214ENST00000554928 FXYD7P58549 80 aa9.02□□□□□ -0.97
SYNE2-214ENST00000554928 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
SYNE2-214ENST00000554928 UBE2CO00762 179 aa9.01□□□□□ -0.97
SYNE2-214ENST00000554928 ZNF705DP0CH99 300 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-214ENST00000554928 ZNF705BP0CI00 300 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-214ENST00000554928 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
SYNE2-214ENST00000554928 ATF4P18848 351 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-214ENST00000554928 ID1P41134 155 aa9.01□□□□□ -0.97
SYNE2-214ENST00000554928 Q6ZRG5 221 aa9.01□□□□□ -0.97
SYNE2-214ENST00000554928 MIR17HGQ75NE6 70 aa9.01□□□□□ -0.97
SYNE2-214ENST00000554928 GPR82Q96P67 336 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms