RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RAI1Q7Z5J4 1906 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-213ENST00000554805 TOMM40O96008 361 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 PSG1P11464 419 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 KLF5Q13887 457 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-213ENST00000554805 RNASE6Q93091 150 aaKnown RBP7.61□□□□□ -1.19
SYNE2-213ENST00000554805 CBY1Q9Y3M2 126 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 S4R3C0 116 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 EPG5Q9HCE0 2579 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
SYNE2-213ENST00000554805 A0A1W2PRD5 423 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 A0A1W2PRF3 423 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 A0A1W2PRM7 423 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 hDV102S1A0JD36 115 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 OR2J3O76001 311 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 TEX45Q8NA69 505 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 ZNF738Q8NE65 137 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 C8orf46Q8TAG6 207 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 TP73-AS1Q9UF72 201 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 CUBNO60494 3623 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 INS-IGF2F8WCM5 200 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 TMEM155Q4W5P6 130 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 LINC00311Q8N616 119 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 TMEM191AQ9H0A3 160 aa7.6□□□□□ -1.19
SYNE2-213ENST00000554805 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 IGHV1-69-2A0A0G2JMI3 117 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 IGFL3Q6UXB1 125 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 NGBQ9NPG2 151 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 SIGLEC9Q9Y336 463 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 NDUFB8O95169 186 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 OR4F17Q8NGA8 305 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 MAP1LC3CQ9BXW4 147 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 ONECUT1Q9UBC0 465 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 MRPS16Q9Y3D3 137 aaKnown RBP7.59□□□□□ -1.19
SYNE2-213ENST00000554805 CREBBPQ92793 2442 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 A0A1B0GXF2 115 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 C2orf70A6NJV1 201 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 THBDP07204 575 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 MYCNOSP40205 109 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 HES1Q14469 280 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 FAM71F2Q6NXP2 309 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 SLC25A39Q9BZJ4 359 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-213ENST00000554805 OTORQ9NRC9 128 aa7.59□□□□□ -1.19
SYNE2-213ENST00000554805 IGHV2-26A0A0B4J1V2 119 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 K7EQM0 130 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 FSTL3O95633 263 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 GP9P14770 177 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 PCP4P48539 62 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 PRSS3P2Q8NHM4 247 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 KLF12Q9Y4X4 402 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 F11RQ9Y624 299 aaKnown RBP7.58□□□□□ -1.2
SYNE2-213ENST00000554805 IGHV1-3A0A0C4DH29 117 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 CBY3A6NI87 242 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 RPS20P60866 119 aaKnown RBP7.58□□□□□ -1.2
SYNE2-213ENST00000554805 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 Q86TA4 180 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 TMEM116Q8NCL8 245 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 TMUB1Q9BVT8 246 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 RAXQ9Y2V3 346 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 ARHGAP32A7KAX9 2087 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 NUDT3O95989 172 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 LTAP01374 205 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 CRYGCP07315 174 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 NBL1P41271 181 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 RIGQ13278 110 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 OR4C5Q8NGB2 326 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 IGFBPL1Q8WX77 278 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 MLST8Q9BVC4 326 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
SYNE2-213ENST00000554805 SOX21Q9Y651 276 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-213ENST00000554805 LOC102724200A0A096LPH7 203 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 MUC21A0A0G2JKD1 596 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 MUC21A0A140T8X8 626 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 E7EQL1 145 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 FCGR2BP31994 310 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 NHLH1Q02575 133 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 PRR30Q53SZ7 412 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 MUC21Q5SSG8 566 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 SLC25A34Q6PIV7 304 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 BPIFA4PQ86YQ2 179 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 C17orf77Q96MU5 243 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 HILPDAQ9Y5L2 63 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 PPIAL4CA0A0B4J2A2 164 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 SNAI2O43623 268 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 LIPFP07098 398 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 OR5AL1P0C617 328 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 CT45A10P0DMU9 189 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 PPIAL4GP0DN37 164 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 Q71RC1 249 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms