RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 TRAPPC1Q9Y5R8 145 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 TRAV3A0A0B4J244 114 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF320A2RRD8 509 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 J3QR06 171 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 IGLV1-47P01700 117 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 MYCNOSP40205 109 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF137PP52743 207 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00205P59089 165 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 SSTP61278 116 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 LTC4SQ16873 150 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 DEFB136Q30KP8 78 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 GCSAMLQ5JQS6 135 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 UTF1Q5T230 341 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 TPTE2P1Q5T6R2 138 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 WDR73Q6P4I2 378 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 MUC7Q8TAX7 377 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 EAF1Q96JC9 268 aaPredicted RBP8.9□□□□□ -0.98
VPS33B-204ENST00000554660 OSTCQ9NRP0 149 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 YTHDF2Q9Y5A9 579 aaKnown RBP8.9□□□□□ -0.98
VPS33B-204ENST00000554660 STARD9Q9P2P6 4700 aa8.9□□□□□ -0.98
VPS33B-204ENST00000554660 SCO2A0A1W2PP80 73 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 M0QZK8 103 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 CT45A6P0DMU7 189 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 CT45A5P0DMU8 189 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 CT45A7P0DMV0 189 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 TAS2R60P59551 318 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 UBE2G2P60604 165 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 HLA-DRB5Q30154 266 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 PDZD11Q5EBL8 140 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 PDPNQ86YL7 162 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 OR5AN1Q8NGI8 311 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 TMEM167AQ8TBQ9 72 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 RAX2Q96IS3 184 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 NABP2Q9BQ15 211 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 LYSTQ99698 3801 aa8.89□□□□□ -0.99
VPS33B-204ENST00000554660 A0A087X0M5 115 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 A0A1B0GX30 115 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 A8MWP6 167 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 BUB1B-PAK6H3BSN5 160 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 ISLRO14498 428 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 RNASE2P10153 161 aaKnown RBP8.88□□□□□ -0.99
VPS33B-204ENST00000554660 CEACAM3P40198 252 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
VPS33B-204ENST00000554660 ERHP84090 104 aaKnown RBP8.88□□□□□ -0.99
VPS33B-204ENST00000554660 Q0VG73 95 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 RPEL1Q2QD12 228 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 C5orf56Q8N8D9 126 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 OCC1Q8TAD7 63 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 TMEM37Q8WXS4 190 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 SEPSECSQ9HD40 501 aaKnown RBP8.88□□□□□ -0.99
VPS33B-204ENST00000554660 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
VPS33B-204ENST00000554660 TEX50A0A1B0GTY4 177 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 LY6LH3BQJ8 138 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 CCL24O00175 119 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 C8orf88P0DMB2 117 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS33B-204ENST00000554660 RAB4BP61018 213 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
VPS33B-204ENST00000554660 ZNF90Q03938 601 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 HES1Q14469 280 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 PVRIGQ6DKI7 326 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 CDPF1Q6NVV7 123 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 LCNL1Q6ZST4 164 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 OR1L4Q8NGR5 311 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 COMMD5Q9GZQ3 224 aa8.87□□□□□ -0.99
VPS33B-204ENST00000554660 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 H0YJW9 148 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 IGHV3-7P01780 117 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
VPS33B-204ENST00000554660 FAM106CPP0CH98 169 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 SAA1P0DJI8 122 aaPredicted RBP8.86□□□□□ -0.99
VPS33B-204ENST00000554660 DEFA4P12838 97 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 OR10J1P30954 320 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 MC5RP33032 325 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 GNG4P50150 75 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 TPPP2P59282 170 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 RPL8P62917 257 aaKnown RBP8.86□□□□□ -0.99
VPS33B-204ENST00000554660 SLC35B1P78383 322 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 TIGITQ495A1 244 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 C9orf66Q5T8R8 295 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 CCDC144NLQ6NUI1 221 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 FAM231DQ6ZW35 169 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 THAP8Q8NA92 274 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 STXBP6Q8NFX7 210 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 RPEQ96AT9 228 aa8.86□□□□□ -0.99
VPS33B-204ENST00000554660 RCHY1Q96PM5 261 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms