RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SRD5A3Q9H8P0 318 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 GSN-AS1Q9NRJ2 163 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 DOK5Q9P104 306 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 DMRT1Q9Y5R6 373 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 RFNGQ9Y644 331 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 DYNC2H1Q8NCM8 4307 aaKnown RBP6.7□□□□□ -1.34
TDP1-208ENST00000553989 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 PMS2P5A8MQ11 134 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 GATCO43716 136 aaKnown RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 RBMXL2O75526 392 aaKnown RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 NXPH3O95157 252 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 PFN1P07737 140 aaKnown RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 OR9G9P0C7N8 305 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 FGF7P21781 194 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 G6PCP35575 357 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 ERVK-16P61578 105 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 SSBP2P81877 361 aaPredicted RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 RHOGP84095 191 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 ATP5G2Q06055 141 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 FFAR4Q5NUL3 377 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 OR8G2PQ6IF36 304 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 KCNIP4Q6PIL6 250 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 OR2K2Q8NGT1 345 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 SRSF12Q8WXF0 261 aaKnown RBP6.69□□□□□ -1.34
TDP1-208ENST00000553989 SMIM7Q9BQ49 75 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 TNCP24821 2201 aa6.69□□□□□ -1.34
TDP1-208ENST00000553989 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
TDP1-208ENST00000553989 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 TGIF2-C20orf24A0A0A6YYL0 155 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 FAM223BA6NKX1 122 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 FNDC10F2Z333 226 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 H7BYZ3 331 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 CLN5O75503 358 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 MT-CO2P00403 227 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 CRYGBP07316 175 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 CXCL1P09341 107 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 CD7P09564 240 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 OPRK1P41145 380 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 RPL30P62888 115 aaKnown RBP6.68□□□□□ -1.34
TDP1-208ENST00000553989 IZUMO4Q1ZYL8 232 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 TMEM177Q53S58 311 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 FAM223AQ8IWN6 122 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 DEFB125Q8N687 156 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 RAB24Q969Q5 203 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 ACY3Q96HD9 319 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 WFDC10AQ9H1F0 79 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 WDR83OSQ9Y284 106 aa6.68□□□□□ -1.34
TDP1-208ENST00000553989 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 UBE2L5PA0A1B0GUS4 154 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 SRRM4A7MD48 611 aaKnown RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 OR11H12B2RN74 326 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 BMPR1BO00238 502 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 S1PR2O95136 353 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 BRI3O95415 125 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 TRGC2P03986 189 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 ADMP35318 185 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 FGF8P55075 233 aaPredicted RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 ELLP55199 621 aaPredicted RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 BRWD1-AS2P59051 145 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 PRSS8Q16651 343 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 SLC16A13Q7RTY0 426 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 TEX45Q8NA69 505 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 PFDN5Q99471 154 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 SSBP4Q9BWG4 385 aaPredicted RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 NPCDR1Q9BY65 106 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 NPVFQ9HCQ7 196 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 HEYLQ9NQ87 328 aaPredicted RBP6.67□□□□□ -1.34
TDP1-208ENST00000553989 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
TDP1-208ENST00000553989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 MARCH11A6NNE9 402 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 OR2J3O76001 311 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 YIF1AO95070 293 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 CXorf1O96002 111 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 HRASP01112 189 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 IFNA10P01566 189 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 TYMSP04818 313 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 SAA1P0DJI8 122 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms