RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 ANXA3P12429 323 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 AZU1P20160 251 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 CLVS1Q8IUQ0 354 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-211ENST00000553801 BAP18Q8IXM2 172 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 BPIFCQ8NFQ6 507 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 SCP2D1Q9UJQ7 156 aa12.37□□□□□ -0.43
SYNE2-211ENST00000553801 PAIP2BQ9ULR5 123 aaKnown RBP12.37□□□□□ -0.43
SYNE2-211ENST00000553801 IGKV1OR2-108A0A075B7D4 117 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 PLAC8L1A1L4L8 177 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 TAS2R60P59551 318 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 C16orf74Q96GX8 76 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 C17orf77Q96MU5 243 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 PPP1R14DQ9NXH3 145 aa12.36□□□□□ -0.43
SYNE2-211ENST00000553801 TIMM8BQ9Y5J9 83 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-211ENST00000553801 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
SYNE2-211ENST00000553801 RGS5O15539 181 aa12.35□□□□□ -0.43
SYNE2-211ENST00000553801 ORM2P19652 201 aa12.35□□□□□ -0.43
SYNE2-211ENST00000553801 RPP30P78346 268 aaKnown RBP12.35□□□□□ -0.43
SYNE2-211ENST00000553801 FGL1Q08830 312 aa12.35□□□□□ -0.43
SYNE2-211ENST00000553801 ZNF738Q8NE65 137 aa12.35□□□□□ -0.43
SYNE2-211ENST00000553801 MED6O75586 246 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 IAPPP10997 89 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 BTF3P20290 206 aaKnown RBP12.34□□□□□ -0.43
SYNE2-211ENST00000553801 RHOBP62745 196 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 TMEM144Q7Z5S9 345 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 RNF182Q8N6D2 247 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 OR10J6PQ8NGY7 276 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-211ENST00000553801 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-211ENST00000553801 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
SYNE2-211ENST00000553801 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 A0A1W2PPQ1 181 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 CTDSPLO15194 276 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 HTN1P15515 57 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 CTF1Q16619 201 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-211ENST00000553801 ZNF503Q96F45 646 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 CIB3Q96Q77 187 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-211ENST00000553801 Q9H3A6 140 aa12.33□□□□□ -0.44
SYNE2-211ENST00000553801 PITX3O75364 302 aa12.32□□□□□ -0.44
SYNE2-211ENST00000553801 ADAP1O75689 374 aa12.32□□□□□ -0.44
SYNE2-211ENST00000553801 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
SYNE2-211ENST00000553801 HIST1H1AQ02539 215 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-211ENST00000553801 OR5I1Q13606 314 aa12.32□□□□□ -0.44
SYNE2-211ENST00000553801 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
SYNE2-211ENST00000553801 NAA50Q9GZZ1 169 aaKnown RBP12.32□□□□□ -0.44
SYNE2-211ENST00000553801 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
SYNE2-211ENST00000553801 M6PRP20645 277 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 GATA2P23769 480 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-211ENST00000553801 KRTAP10-2P60368 255 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 RAP2BP61225 183 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 IL18Q14116 193 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 UPK3BQ9BT76 320 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 MCUBQ9NWR8 336 aa12.31□□□□□ -0.44
SYNE2-211ENST00000553801 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 EPM2AB3EWF7 344 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 H3BRN7 92 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 CTDSP2O14595 271 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 SLC25A6P12236 298 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 LRRC20Q8TCA0 184 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
SYNE2-211ENST00000553801 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
SYNE2-211ENST00000553801 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 CDKN1BP46527 198 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 PSG3Q16557 428 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-211ENST00000553801 S100A7AQ86SG5 101 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 RNASE8Q8TDE3 154 aaKnown RBP12.29□□□□□ -0.44
SYNE2-211ENST00000553801 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 SHANK2-AS3Q9BTD1 123 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
SYNE2-211ENST00000553801 H7BYZ3 331 aa12.28□□□□□ -0.44
SYNE2-211ENST00000553801 SYNGR2O43760 224 aa12.28□□□□□ -0.44
SYNE2-211ENST00000553801 CXCL3P19876 107 aa12.28□□□□□ -0.44
SYNE2-211ENST00000553801 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
SYNE2-211ENST00000553801 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
SYNE2-211ENST00000553801 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
SYNE2-211ENST00000553801 A0A0J9YY99 117 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 H3BNG1 76 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 ZNF701M0R085 212 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-211ENST00000553801 WRBO00258 174 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 HYPMO75409 117 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 IL5P05113 134 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 DLK1P80370 383 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 ESRGQ1W209 222 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 SPANXN5Q5MJ07 72 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 PTTG2Q9NZH5 202 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms