RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MORN3Q6PF18 240 aaPredicted RBP14.88□□□□□ -0.03
FOXA1-203ENST00000553751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 RSG1Q9BU20 258 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 ARV1Q9H2C2 271 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 OR5AC2Q9NZP5 309 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 UBE2L5PA0A1B0GUS4 154 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 H3BMM0 161 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 HLA-DRB4P13762 266 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 CAMLGP49069 296 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 DEFB1P60022 68 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 HBG1P69891 147 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 HBG2P69892 147 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 EWSR1Q01844 656 aaKnown RBP eCLIP14.87□□□□□ -0.03
FOXA1-203ENST00000553751 IL17DQ8TAD2 202 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 LINC00052Q96N35 136 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 RARRES2Q99969 163 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 HLA-DRB4X5D2U9 266 aa14.87□□□□□ -0.03
FOXA1-203ENST00000553751 E5RGE8 158 aa14.86□□□□□ -0.03
FOXA1-203ENST00000553751 RLN2P04090 185 aa14.86□□□□□ -0.03
FOXA1-203ENST00000553751 TMEM41BQ5BJD5 291 aa14.86□□□□□ -0.03
FOXA1-203ENST00000553751 GDF5OSQ5U4N7 250 aa14.86□□□□□ -0.03
FOXA1-203ENST00000553751 SAV1Q9H4B6 383 aaPredicted RBP14.86□□□□□ -0.03
FOXA1-203ENST00000553751 TENM2Q9NT68 2774 aa14.86□□□□□ -0.03
FOXA1-203ENST00000553751 RPL7P18124 248 aaKnown RBP14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PRR20EP86478 221 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PRR20CP86479 221 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PRR20DP86480 221 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PRR20BP86481 221 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PRR20AP86496 221 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 RAB31Q13636 194 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 FOXI2Q6ZQN5 318 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 S100A7AQ86SG5 101 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 OR11H2Q8NH07 326 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 PPP1R1CQ8WVI7 109 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 C16orf92Q96LL3 132 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 C20orf173Q96LM9 149 aa14.85□□□□□ -0.03
FOXA1-203ENST00000553751 NHLH2Q02577 135 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 BAXQ07812 192 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 ATP6V1FQ16864 119 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 MIC13Q5XKP0 118 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 LINC00305Q7Z4B0 112 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 TMEM37Q8WXS4 190 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 ALG5Q9Y673 324 aa14.84□□□□□ -0.03
FOXA1-203ENST00000553751 TRAV8-2A0A0B4J237 113 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 MRPS12O15235 138 aaKnown RBP14.83□□□□□ -0.04
FOXA1-203ENST00000553751 COX7A2P2O60397 106 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 ATF4P18848 351 aaPredicted RBP14.83□□□□□ -0.04
FOXA1-203ENST00000553751 CSNK1G2-AS1Q8NCQ2 148 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 OR5C1Q8NGR4 320 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 CHAC2Q8WUX2 184 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 SLC25A31Q9H0C2 315 aa14.83□□□□□ -0.04
FOXA1-203ENST00000553751 A0A087X0K7 114 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 F6UB75 175 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 MPC2O95563 127 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 FGF7P21781 194 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 RPL29P47914 159 aaKnown RBP14.82□□□□□ -0.04
FOXA1-203ENST00000553751 OPCMLQ14982 345 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 MORN5Q5VZ52 161 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 RNF126Q9BV68 326 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 C11orf68Q9H3H3 251 aaKnown RBP14.82□□□□□ -0.04
FOXA1-203ENST00000553751 CLEC5AQ9NY25 188 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 RNF24Q9Y225 148 aa14.82□□□□□ -0.04
FOXA1-203ENST00000553751 RYR2Q92736 4967 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 ELOA3CA0A087WX78 387 aaPredicted RBP14.81□□□□□ -0.04
FOXA1-203ENST00000553751 NUTF2P61970 127 aaKnown RBP14.81□□□□□ -0.04
FOXA1-203ENST00000553751 C10orf113Q5VZT2 155 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 IGFL4Q6B9Z1 124 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 CLUHP3Q96NS8 147 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 LYSTQ99698 3801 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 RPRMQ9NS64 109 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 SLC39A9Q9NUM3 307 aa14.81□□□□□ -0.04
FOXA1-203ENST00000553751 A0A0J9YX75 114 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 ZNF705EA8MWA4 302 aaPredicted RBP14.8□□□□□ -0.04
FOXA1-203ENST00000553751 PET100P0DJ07 73 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 B2MP61769 119 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 FGL1Q08830 312 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 SPATA31B1PQ5VZV4 182 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 Q6ZRG5 221 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 RNF182Q8N6D2 247 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 NPCDR1Q9BY65 106 aa14.8□□□□□ -0.04
FOXA1-203ENST00000553751 MPDU1O75352 247 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 IGKV3-20P01619 116 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 CXCL3P19876 107 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 CLINT1Q14677 625 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 EBLN2Q6P2I7 272 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 ZNF709Q8N972 641 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 Q8NAQ8 132 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 THAP6Q8TBB0 222 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 C1QTNF4Q9BXJ3 329 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 XCL2Q9UBD3 114 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 PXMP4Q9Y6I8 212 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 X6R8D5 127 aa14.79□□□□□ -0.04
FOXA1-203ENST00000553751 SACSQ9NZJ4 4579 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 FAM78BQ5VT40 261 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 OR4B1Q8NGF8 309 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 OR1L4Q8NGR5 311 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 PFDN5Q99471 154 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 MBD2Q9UBB5 411 aa14.78□□□□□ -0.04
FOXA1-203ENST00000553751 A8MTW9 85 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms