RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NPPCP23582 126 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 CRYBB3P26998 211 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 SRSF2Q01130 221 aaKnown RBP13.48□□□□□ -0.25
PSEN1-206ENST00000553447 C10orf91Q5T1B1 145 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 C18orf65Q6ZTR6 163 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 CYB561D1Q8N8Q1 229 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 SEC11CQ9BY50 192 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 U3KQE9 123 aa13.48□□□□□ -0.25
PSEN1-206ENST00000553447 CUBNO60494 3623 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 A0A087WW49 117 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 BUB3O43684 328 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 NBEAP1P0C6P0 100 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 IGLC2P0DOY2 106 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 RPL7P18124 248 aaKnown RBP13.47□□□□□ -0.25
PSEN1-206ENST00000553447 RPEL1Q2QD12 228 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 OR4F17Q8NGA8 305 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 ZNF586Q9NXT0 402 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 RNF114Q9Y508 228 aa13.47□□□□□ -0.25
PSEN1-206ENST00000553447 F8P00451 2351 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 NSD1Q96L73 2696 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-206ENST00000553447 ZNF320A2RRD8 509 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 F6UZH7 168 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 H3BQ15 152 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 HAX1O00165 279 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 PDE6DO43924 150 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 APOHP02749 345 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-206ENST00000553447 SNRPCP09234 159 aaKnown RBP13.46□□□□□ -0.25
PSEN1-206ENST00000553447 CD28P10747 220 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 PROK1P58294 105 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 C1orf194Q5T5A4 169 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 BLNKQ8WV28 456 aa13.46□□□□□ -0.25
PSEN1-206ENST00000553447 CARHSP1Q9Y2V2 147 aaKnown RBP13.46□□□□□ -0.25
PSEN1-206ENST00000553447 GGTLC3B5MD39 225 aa13.45□□□□□ -0.26
PSEN1-206ENST00000553447 CEBPGP53567 150 aa13.45□□□□□ -0.26
PSEN1-206ENST00000553447 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
PSEN1-206ENST00000553447 FAM90A2PQ658T7 463 aa13.45□□□□□ -0.26
PSEN1-206ENST00000553447 CCDC28AQ8IWP9 274 aa13.45□□□□□ -0.26
PSEN1-206ENST00000553447 NKX6-2Q9C056 277 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-206ENST00000553447 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 IGHV3-66A0A0C4DH42 116 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 H3BTX0 84 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 K7EMT4 169 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 APOC3P02656 99 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 KLHL30-AS1Q8NEE0 82 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 GPR82Q96P67 336 aa13.44□□□□□ -0.26
PSEN1-206ENST00000553447 DAZ1Q9NQZ3 744 aaKnown RBP13.44□□□□□ -0.26
PSEN1-206ENST00000553447 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 HOXD3P31249 432 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-206ENST00000553447 MYCNOSP40205 109 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
PSEN1-206ENST00000553447 SUMO1P63165 101 aaKnown RBP13.43□□□□□ -0.26
PSEN1-206ENST00000553447 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 C16orf54Q6UWD8 224 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 UFC1Q9Y3C8 167 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 SMAD5-AS1Q9Y6J3 95 aa13.43□□□□□ -0.26
PSEN1-206ENST00000553447 IGHV7-4-1A0A0J9YVY3 117 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 LINC01619G3V211 115 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 LGALS9O00182 355 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 NDUFB4O95168 129 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 ATF4P18848 351 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-206ENST00000553447 TM4SF20Q53R12 229 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 C1QL4Q86Z23 238 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 GLMPQ8WWB7 406 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 C11orf52Q96A22 123 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 C17orf77Q96MU5 243 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 CITED2Q99967 270 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-206ENST00000553447 ELOVL1Q9BW60 279 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 Q9H3A6 140 aa13.42□□□□□ -0.26
PSEN1-206ENST00000553447 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-206ENST00000553447 A0A087X0K7 114 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 A0A1W2PS18 150 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 GALR1P47211 349 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 PDE6HQ13956 83 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 GUCA2BQ16661 112 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 C8orf86Q6ZUL3 223 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 OR11H1Q8NG94 326 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 DPF1Q92782 380 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 RPUSD4Q96CM3 377 aaKnown RBP13.41□□□□□ -0.26
PSEN1-206ENST00000553447 GRAMD2BQ96HH9 432 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 PARLQ9H300 379 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 OTORQ9NRC9 128 aa13.41□□□□□ -0.26
PSEN1-206ENST00000553447 A0A1B0GUS0 222 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 PGPA6NDG6 321 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 A8MWP6 167 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 SLC17A3O00476 420 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms