RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
CPSF2-202ENST00000553427 STHQ8IWL8 128 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 ASB13Q8WXK3 278 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 CSTL1Q9H114 145 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 MED28Q9H204 178 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 ARV1Q9H2C2 271 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 SLC25A22Q9H936 323 aa13.58□□□□□ -0.24
CPSF2-202ENST00000553427 LYL1P12980 280 aa13.57□□□□□ -0.24
CPSF2-202ENST00000553427 RPL7P18124 248 aaKnown RBP13.57□□□□□ -0.24
CPSF2-202ENST00000553427 ID1P41134 155 aa13.57□□□□□ -0.24
CPSF2-202ENST00000553427 RPL29P47914 159 aaKnown RBP13.57□□□□□ -0.24
CPSF2-202ENST00000553427 NHLH2Q02577 135 aa13.57□□□□□ -0.24
CPSF2-202ENST00000553427 OR5C1Q8NGR4 320 aa13.57□□□□□ -0.24
CPSF2-202ENST00000553427 COX7A2P2O60397 106 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 FCN2Q15485 313 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 OR11H7Q8NGC8 314 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 RNF183Q96D59 192 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 C17orf77Q96MU5 243 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 MBD2Q9UBB5 411 aa13.56□□□□□ -0.24
CPSF2-202ENST00000553427 A0A087X0K7 114 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 SPP1P10451 314 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 FGF7P21781 194 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 TMEM41BQ5BJD5 291 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 MORN3Q6PF18 240 aaPredicted RBP13.55□□□□□ -0.24
CPSF2-202ENST00000553427 Q6ZRG5 221 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 TMEM37Q8WXS4 190 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 RSG1Q9BU20 258 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 SLC39A9Q9NUM3 307 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 HSPB11Q9Y547 144 aa13.55□□□□□ -0.24
CPSF2-202ENST00000553427 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 SPRY2O43597 315 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 B2MP61769 119 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 ACTL10Q5JWF8 245 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 LINC00305Q7Z4B0 112 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 GATAD1Q8WUU5 269 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 PFDN5Q99471 154 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
CPSF2-202ENST00000553427 MRPS12O15235 138 aaKnown RBP13.53□□□□□ -0.24
CPSF2-202ENST00000553427 GIPP09681 153 aaPredicted RBP13.53□□□□□ -0.24
CPSF2-202ENST00000553427 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 ATF4P18848 351 aaPredicted RBP13.53□□□□□ -0.24
CPSF2-202ENST00000553427 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
CPSF2-202ENST00000553427 CLINT1Q14677 625 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 C10orf113Q5VZT2 155 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 SPATA31B1PQ5VZV4 182 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 CLUHP3Q96NS8 147 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 ATP5SQ99766 215 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 KCNIP2Q9NS61 270 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 PXMP4Q9Y6I8 212 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
CPSF2-202ENST00000553427 H3BMM0 161 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 C3orf84H3BNL1 204 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 CA1P00915 261 aaPredicted RBP13.52□□□□□ -0.25
CPSF2-202ENST00000553427 CXCL2P19875 107 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 MUC7Q8TAX7 377 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 THAP6Q8TBB0 222 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 C16orf92Q96LL3 132 aa13.52□□□□□ -0.25
CPSF2-202ENST00000553427 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
CPSF2-202ENST00000553427 SAV1Q9H4B6 383 aaPredicted RBP13.52□□□□□ -0.25
CPSF2-202ENST00000553427 GIG44P09565 113 aaPredicted RBP13.51□□□□□ -0.25
CPSF2-202ENST00000553427 FGL1Q08830 312 aa13.51□□□□□ -0.25
CPSF2-202ENST00000553427 LINC00052Q96N35 136 aa13.51□□□□□ -0.25
CPSF2-202ENST00000553427 BPIFA4PQ86YQ2 179 aa13.5□□□□□ -0.25
CPSF2-202ENST00000553427 PARD6GQ9BYG4 376 aaPredicted RBP13.5□□□□□ -0.25
CPSF2-202ENST00000553427 RPRMQ9NS64 109 aa13.5□□□□□ -0.25
CPSF2-202ENST00000553427 TRAV8-2A0A0B4J237 113 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 C4BPBP20851 252 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 MORN5Q5VZ52 161 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 ZNF709Q8N972 641 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 AGRNO00468 2067 aa13.49□□□□□ -0.25
CPSF2-202ENST00000553427 A8MTW9 85 aa13.48□□□□□ -0.25
CPSF2-202ENST00000553427 NUTF2P61970 127 aaKnown RBP13.48□□□□□ -0.25
CPSF2-202ENST00000553427 LCN15Q6UWW0 184 aa13.48□□□□□ -0.25
CPSF2-202ENST00000553427 AQP10Q96PS8 301 aa13.48□□□□□ -0.25
CPSF2-202ENST00000553427 CSMD3Q7Z407 3707 aa13.48□□□□□ -0.25
CPSF2-202ENST00000553427 A0A0J9YX75 114 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 IGLC2P0DOY2 106 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 GDF5OSQ5U4N7 250 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 EBLN2Q6P2I7 272 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 HRH4Q9H3N8 390 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
CPSF2-202ENST00000553427 IFNA5P01569 189 aa13.46□□□□□ -0.25
CPSF2-202ENST00000553427 GUK1Q16774 197 aa13.46□□□□□ -0.25
CPSF2-202ENST00000553427 IL17DQ8TAD2 202 aa13.46□□□□□ -0.25
CPSF2-202ENST00000553427 TMEM14CQ9P0S9 112 aa13.46□□□□□ -0.25
CPSF2-202ENST00000553427 KMT2CQ8NEZ4 4911 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms