RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 ID3Q02535 119 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 FGL1Q08830 312 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 NIPSNAP3BQ9BS92 247 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 SRRQ9GZT4 340 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 RNF24Q9Y225 148 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 HIGD1AQ9Y241 93 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
LINC00643-202ENST00000553426 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 SSSCA1O60232 199 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 HYPMO75409 117 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 ADAP1O75689 374 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 NDUFB6O95139 128 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 SELENOTP62341 195 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 OXA1LQ15070 435 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 C4orf46Q504U0 113 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 CYP2G1PQ6ZSU1 146 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 SMIM8Q96KF7 97 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 C20orf173Q96LM9 149 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 SLC25A39Q9BZJ4 359 aaPredicted RBP9.12□□□□□ -0.95
LINC00643-202ENST00000553426 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 DNAH2Q9P225 4427 aa9.12□□□□□ -0.95
LINC00643-202ENST00000553426 INSP01308 110 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 OR5G3P0C626 314 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 OR4E1P0C645 316 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 B2MP61769 119 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 CNPY1Q3B7I2 92 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 GSG1LQ6UXU4 331 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 TMEM182Q6ZP80 229 aaPredicted RBP9.11□□□□□ -0.95
LINC00643-202ENST00000553426 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 IGF2BP2-AS1Q96M15 143 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 SCRT1Q9BWW7 348 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 NPVFQ9HCQ7 196 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 MGAT4CQ9UBM8 478 aa9.11□□□□□ -0.95
LINC00643-202ENST00000553426 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
LINC00643-202ENST00000553426 LINC00854A0A1B0GVQ3 168 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 H3BRN7 92 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 SCGB1D2O95969 90 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 LINC00869P0C866 280 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 HTN3P15516 51 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 CNN1P51911 297 aaKnown RBP9.1□□□□□ -0.95
LINC00643-202ENST00000553426 DAD1P61803 113 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 RRAS2P62070 204 aaPredicted RBP9.1□□□□□ -0.95
LINC00643-202ENST00000553426 DLK1P80370 383 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 BAK1Q16611 211 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 ZNF738Q8NE65 137 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 OR10P1Q8NGE3 313 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 SHANK2-AS3Q9BTD1 123 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
LINC00643-202ENST00000553426 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
LINC00643-202ENST00000553426 ANXA7P20073 488 aaKnown RBP9.09□□□□□ -0.95
LINC00643-202ENST00000553426 PLP1P60201 277 aa9.09□□□□□ -0.95
LINC00643-202ENST00000553426 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
LINC00643-202ENST00000553426 TEPPQ6URK8 271 aa9.09□□□□□ -0.95
LINC00643-202ENST00000553426 ARL6Q9H0F7 186 aa9.09□□□□□ -0.95
LINC00643-202ENST00000553426 RBM38Q9H0Z9 239 aaKnown RBP9.09□□□□□ -0.95
LINC00643-202ENST00000553426 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
LINC00643-202ENST00000553426 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 A8MTW9 85 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 M0R2N4 97 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 GOSR2O14653 212 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 TSC22D2O75157 780 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 METTL15P1P0C7V9 234 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 TAS2R30P59541 319 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 RHOBP62745 196 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 ZNF846Q147U1 533 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 PXDC1Q5TGL8 231 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 AMTNQ6UX39 209 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 OR11H7Q8NGC8 314 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
LINC00643-202ENST00000553426 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 PMS2P5A8MQ11 134 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 LYRM9A8MSI8 78 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 M0R2Z0 102 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
LINC00643-202ENST00000553426 RNF212Q495C1 297 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 UHRF2Q96PU4 802 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 ARV1Q9H2C2 271 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 PLA2G2EQ9NZK7 142 aa9.07□□□□□ -0.96
LINC00643-202ENST00000553426 A0A087X0K7 114 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 K7EPK0 472 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 L7N2F9 121 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 CXCL3P19876 107 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 TSPOP30536 169 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 VAMP2P63027 116 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 SLC38A11Q08AI6 406 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 RAB31Q13636 194 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 PSG3Q16557 428 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms