RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ARPC5LQ9BPX5 153 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 HELTA6NFD8 242 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 K7EQG2 157 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 SOCS3O14543 225 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 JTBO76095 146 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 CD7P09564 240 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 ODF3L2Q3SX64 289 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 FFAR4Q5NUL3 377 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 ZNF709Q8N972 641 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 NARS2Q96I59 477 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 PFDN5Q99471 154 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 PLA2G2EQ9NZK7 142 aa11.07□□□□□ -0.64
MTHFD1-204ENST00000553405 BORCS7-ASMTA0A0B4J1R7 106 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 GUCA2BQ16661 112 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 ZFP69Q49AA0 526 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 GBGT1Q8N5D6 347 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 NRN1Q9NPD7 142 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
MTHFD1-204ENST00000553405 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 IGLC2P0DOY2 106 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 SPP1P10451 314 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 RAB2AP61019 212 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 STOML3Q8TAV4 291 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 PPP1R14BQ96C90 147 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 GNPNAT1Q96EK6 184 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 GPR82Q96P67 336 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
MTHFD1-204ENST00000553405 A0A087X0K7 114 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 KANTRA0A1W2PQU2 76 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 OR4C46A6NHA9 309 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 M6PRP20645 277 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 SERF2P84101 59 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 FAM78BQ5VT40 261 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
MTHFD1-204ENST00000553405 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 H3BQ15 152 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 S100A7P31151 101 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 TFPI2P48307 235 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 NKX2-5P52952 324 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 CD81P60033 236 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 DEFA6Q01524 100 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 CITED4Q96RK1 184 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 RPRMQ9NS64 109 aa11.03□□□□□ -0.64
MTHFD1-204ENST00000553405 EIF3GO75821 320 aaKnown RBP eCLIP11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 GALR1P47211 349 aa11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 ZNF726P1Q15940 193 aa11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 S100A7AQ86SG5 101 aa11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 SAT2Q96F10 170 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-204ENST00000553405 COL7A1Q02388 2944 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 A8MZ25 164 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 PFDN1O60925 122 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 ACOT6Q3I5F7 207 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 BPIFA4PQ86YQ2 179 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 WFDC3Q8IUB2 231 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 HRH4Q9H3N8 390 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 ZNF586Q9NXT0 402 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
MTHFD1-204ENST00000553405 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
MTHFD1-204ENST00000553405 SLC17A3O00476 420 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 SEC11BP0C7V7 166 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 PYYP10082 97 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 RHOBP62745 196 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 ZNF124Q15973 351 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 LINC00322Q6ZN03 302 aaPredicted RBP11□□□□□ -0.65
MTHFD1-204ENST00000553405 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 DEFB125Q8N687 156 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 OR10G4Q8NGN3 311 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 OR10G9Q8NGN4 311 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 OR10G7Q8NGN6 311 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 FXYD5Q96DB9 178 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 C20orf173Q96LM9 149 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 UBQLN2Q9UHD9 624 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
MTHFD1-204ENST00000553405 OR11H12B2RN74 326 aa10.99□□□□□ -0.65
MTHFD1-204ENST00000553405 BOLA2-SMG1P6H3BVE0 249 aa10.99□□□□□ -0.65
MTHFD1-204ENST00000553405 ISLRO14498 428 aa10.99□□□□□ -0.65
MTHFD1-204ENST00000553405 NDUFB4O95168 129 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms