RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 H3BRN7 92 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 SOCS3O14543 225 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 SSNA1O43805 119 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 DOK5Q9P104 306 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 CAMLGP49069 296 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 VWC2Q2TAL6 325 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 MGST2Q99735 147 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-204ENST00000553324 RPRMQ9NS64 109 aa11.21□□□□□ -0.61
SHMT2-204ENST00000553324 CSMD3Q7Z407 3707 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 SIX6O95475 246 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-204ENST00000553324 CHAC2Q8WUX2 184 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 SCRT1Q9BWW7 348 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
SHMT2-204ENST00000553324 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 MPDU1O75352 247 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 PET100P0DJ07 73 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 UHRF2Q96PU4 802 aa11.19□□□□□ -0.62
SHMT2-204ENST00000553324 C11orf68Q9H3H3 251 aaKnown RBP11.19□□□□□ -0.62
SHMT2-204ENST00000553324 PTTG1O95997 202 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 MIFP14174 115 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
SHMT2-204ENST00000553324 BAXQ07812 192 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 FGL1Q08830 312 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 LRRC37A5PQ49AS3 106 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 LRRC20Q8TCA0 184 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 PFDN5Q99471 154 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 STARD9Q9P2P6 4700 aa11.18□□□□□ -0.62
SHMT2-204ENST00000553324 A0A087X0K7 114 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 ZNF705EA8MWA4 302 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-204ENST00000553324 C4BPBP20851 252 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 H2BFSP57053 126 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 PRR20EP86478 221 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 PRR20CP86479 221 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 PRR20DP86480 221 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 PRR20BP86481 221 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 PRR20AP86496 221 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 MFFQ9GZY8 342 aa11.17□□□□□ -0.62
SHMT2-204ENST00000553324 A0A0J9YX75 114 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 NUPR2A6NF83 97 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
SHMT2-204ENST00000553324 CXCL2P19875 107 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 B2MP61769 119 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 EWSR1Q01844 656 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHMT2-204ENST00000553324 NHLH2Q02577 135 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 OR5C1Q8NGR4 320 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 OR5AC2Q9NZP5 309 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 XCL2Q9UBD3 114 aa11.16□□□□□ -0.62
SHMT2-204ENST00000553324 MPC2O95563 127 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 FGF7P21781 194 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 PSG9Q00887 426 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
SHMT2-204ENST00000553324 H0YIZ8 118 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 JTBO76095 146 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 OPCMLQ14982 345 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-204ENST00000553324 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
SHMT2-204ENST00000553324 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-204ENST00000553324 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 SMIM9A6NGZ8 99 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
SHMT2-204ENST00000553324 AMBPP02760 352 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 CXCL3P19876 107 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 PSG3Q16557 428 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 GUK1Q16774 197 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 Q8NAQ8 132 aa11.13□□□□□ -0.63
SHMT2-204ENST00000553324 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms