RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
ACTN1-207ENST00000553290 C12orf45Q8N5I9 185 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-207ENST00000553290 NEU1Q99519 415 aa9.36□□□□□ -0.91
ACTN1-207ENST00000553290 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
ACTN1-207ENST00000553290 DOK5Q9P104 306 aa9.36□□□□□ -0.91
ACTN1-207ENST00000553290 RNF24Q9Y225 148 aa9.36□□□□□ -0.91
ACTN1-207ENST00000553290 A0A0J9YX75 114 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 FAM240BA0A1B0GVZ2 78 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 C5orf51A6NDU8 294 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 DEDDO75618 318 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 OR5G3P0C626 314 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 RPL7P18124 248 aaKnown RBP9.35□□□□□ -0.91
ACTN1-207ENST00000553290 HLA-DMBP28068 263 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 PSG9Q00887 426 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 PXDC1Q5TGL8 231 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF705AQ6ZN79 300 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-207ENST00000553290 C20orf173Q96LM9 149 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 SEC22CQ9BRL7 303 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
ACTN1-207ENST00000553290 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF705FA8MVS1 300 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-207ENST00000553290 F6UB75 175 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 GOSR2O14653 212 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-207ENST00000553290 FXYD7P58549 80 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 GSG1LQ6UXU4 331 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF546Q86UE3 836 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 C2orf50Q96LR7 162 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
ACTN1-207ENST00000553290 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
ACTN1-207ENST00000553290 TMEM189A5PLL7 270 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 IGLL5B9A064 214 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 AGPAT2O15120 278 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 DUSP14O95147 198 aaKnown RBP9.33□□□□□ -0.92
ACTN1-207ENST00000553290 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-207ENST00000553290 BCAP31P51572 246 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 FGL1Q08830 312 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 SLC38A11Q08AI6 406 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 ARL16Q0P5N6 197 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 ASAH1Q13510 395 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 Q6ZTC4 211 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
ACTN1-207ENST00000553290 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 A0A087X0K7 114 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 A8MTW9 85 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 CAV2P51636 162 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 PATE2Q6UY27 113 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 GOLT1BQ9Y3E0 138 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
ACTN1-207ENST00000553290 TRAV8-2A0A0B4J237 113 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 AMBPP02760 352 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 RAB31Q13636 194 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 IGFL4Q6B9Z1 124 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 C11orf1Q9H5F2 150 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
ACTN1-207ENST00000553290 DEFB131BA0A096LNP1 70 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 FAM24AA6NFZ4 105 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 A6NHS1 94 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 HBE1P02100 147 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
ACTN1-207ENST00000553290 S100A10P60903 97 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 IL15RAQ13261 267 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 ZNF738Q8NE65 137 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 ENKURQ8TC29 256 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 LRRC20Q8TCA0 184 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 IGF2BP2-AS1Q96M15 143 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 MGST2Q99735 147 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
ACTN1-207ENST00000553290 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-207ENST00000553290 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-207ENST00000553290 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 UPK1BO75841 260 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 CST7O76096 145 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 CXCL2P19875 107 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 CXCL3P19876 107 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 S100A11P31949 105 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 CAMLGP49069 296 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 SULT1A1P50225 295 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 RAB32Q13637 225 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 Q6ZRG5 221 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 NRARPQ7Z6K4 114 aa9.29□□□□□ -0.92
ACTN1-207ENST00000553290 BPIFA4PQ86YQ2 179 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms