RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 UBE2L5PA0A1B0GUS4 154 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 IFNA5P01569 189 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 RPL7P18124 248 aaKnown RBP7.88□□□□□ -1.15
PTCH1-225ENST00000551845 CLINT1Q14677 625 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 MIC13Q5XKP0 118 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 ZNF709Q8N972 641 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 SHANK2-AS3Q9BTD1 123 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 RSG1Q9BU20 258 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 MAP6D1Q9H9H5 199 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 HSPB11Q9Y547 144 aa7.88□□□□□ -1.15
PTCH1-225ENST00000551845 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
PTCH1-225ENST00000551845 C17orf112F2Z3M2 114 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 COX7A2P2O60397 106 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 ZNF688P0C7X2 276 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 APOC4P55056 127 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 B2MP61769 119 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 SAMD13Q5VXD3 122 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 C10orf113Q5VZT2 155 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 LEMD1Q68G75 181 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 LINC00305Q7Z4B0 112 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 FAM24BQ8N5W8 94 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 TMEM37Q8WXS4 190 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 UHRF2Q96PU4 802 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 ATP5SQ99766 215 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
PTCH1-225ENST00000551845 SLC39A9Q9NUM3 307 aa7.87□□□□□ -1.15
PTCH1-225ENST00000551845 KIR2DL5BA0A0G2JN68 375 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 KIR2DL5BA0A0G2JPC4 375 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 H3BRN7 92 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 UBE2CO00762 179 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 RPL35AP18077 110 aaKnown RBP7.86□□□□□ -1.15
PTCH1-225ENST00000551845 MEOX2P50222 304 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 OPCMLQ14982 345 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 ZNF124Q15973 351 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 PSMG4Q5JS54 123 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 STHQ8IWL8 128 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 KIR2DL5AQ8N109 375 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 INO80EQ8NBZ0 244 aaPredicted RBP7.86□□□□□ -1.15
PTCH1-225ENST00000551845 OR2T35Q8NGX2 323 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 GATAD1Q8WUU5 269 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 LINC00052Q96N35 136 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 PFDN5Q99471 154 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 TM2D3Q9BRN9 247 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 SCRT1Q9BWW7 348 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 NPCDR1Q9BY65 106 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 SMIM3Q9BZL3 60 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 CSTL1Q9H114 145 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 SLC25A32Q9H2D1 315 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
PTCH1-225ENST00000551845 ISLRO14498 428 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
PTCH1-225ENST00000551845 Q5BKY6 102 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 BPIFA4PQ86YQ2 179 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 LRRC20Q8TCA0 184 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 RCHY1Q96PM5 261 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 KCNIP2Q9NS61 270 aa7.85□□□□□ -1.15
PTCH1-225ENST00000551845 RYR2Q92736 4967 aa7.84□□□□□ -1.15
PTCH1-225ENST00000551845 PSMB3P49720 205 aa7.84□□□□□ -1.15
PTCH1-225ENST00000551845 ACTL10Q5JWF8 245 aa7.84□□□□□ -1.15
PTCH1-225ENST00000551845 Q6ZWC4 215 aa7.84□□□□□ -1.15
PTCH1-225ENST00000551845 AQP10Q96PS8 301 aa7.84□□□□□ -1.15
PTCH1-225ENST00000551845 FXYD6-FXYD2A0A087WZ82 144 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 KNCNA6PVL3 124 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 SOCS3O14543 225 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 ZNF266Q14584 549 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 MUC7Q8TAX7 377 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 PARD6GQ9BYG4 376 aaPredicted RBP7.83□□□□□ -1.16
PTCH1-225ENST00000551845 WFDC1Q9HC57 220 aa7.83□□□□□ -1.16
PTCH1-225ENST00000551845 TRAV5A0A0B4J249 113 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 SPRY2O43597 315 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 NUTF2P61970 127 aaKnown RBP7.82□□□□□ -1.16
PTCH1-225ENST00000551845 SPATA31B1PQ5VZV4 182 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 MORN3Q6PF18 240 aaPredicted RBP7.82□□□□□ -1.16
PTCH1-225ENST00000551845 RPRMQ9NS64 109 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
PTCH1-225ENST00000551845 A0A087X0K7 114 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 LCE6AA0A183 80 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 H3BMM0 161 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
PTCH1-225ENST00000551845 SPP1P10451 314 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 TMEM41BQ5BJD5 291 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 FOXI2Q6ZQN5 318 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 TRPT1Q86TN4 253 aaKnown RBP7.81□□□□□ -1.16
PTCH1-225ENST00000551845 C17orf77Q96MU5 243 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 HRH4Q9H3N8 390 aa7.81□□□□□ -1.16
PTCH1-225ENST00000551845 TNFSF18Q9UNG2 199 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms