RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 BAXQ07812 192 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 MORN3Q6PF18 240 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 ARL6Q9H0F7 186 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 ARV1Q9H2C2 271 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 OR5AC2Q9NZP5 309 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 ALG5Q9Y673 324 aa11.32□□□□□ -0.6
PRPF40B-211ENST00000551063 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
PRPF40B-211ENST00000551063 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF40B-211ENST00000551063 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
PRPF40B-211ENST00000551063 MPDU1O75352 247 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 MPC2O95563 127 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PRR20EP86478 221 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PRR20CP86479 221 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PRR20DP86480 221 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PRR20BP86481 221 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PRR20AP86496 221 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 OPCMLQ14982 345 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 PATE2Q6UY27 113 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 IL17DQ8TAD2 202 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 RSG1Q9BU20 258 aa11.3□□□□□ -0.6
PRPF40B-211ENST00000551063 ELOA3CA0A087WX78 387 aaPredicted RBP11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 HLA-DRB4P13762 266 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 Q6ZRG5 221 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 OR5C1Q8NGR4 320 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 LINC00052Q96N35 136 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 DYNC2H1Q8NCM8 4307 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-211ENST00000551063 A0A087X0K7 114 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 H3BMM0 161 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 FGF7P21781 194 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 NHLH2Q02577 135 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-211ENST00000551063 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 C4BPBP20851 252 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 B2MP61769 119 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 RGS21Q2M5E4 152 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 C10orf113Q5VZT2 155 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 PFDN5Q99471 154 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 RNF126Q9BV68 326 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
PRPF40B-211ENST00000551063 CXCL2P19875 107 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 CXCL3P19876 107 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 RARRES2Q99969 163 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 MED28Q9H204 178 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 KCNIP2Q9NS61 270 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 MBD2Q9UBB5 411 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
PRPF40B-211ENST00000551063 SACSQ9NZJ4 4579 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 TRAV8-2A0A0B4J237 113 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 CLINT1Q14677 625 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 C20orf173Q96LM9 149 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 HSPB11Q9Y547 144 aa11.25□□□□□ -0.61
PRPF40B-211ENST00000551063 RPL12P30050 165 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 DEFB1P60022 68 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 FGL1Q08830 312 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 OXA1LQ15070 435 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 FCN2Q15485 313 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 THAP6Q8TBB0 222 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 ATP5SQ99766 215 aa11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-211ENST00000551063 A0A0J9YX75 114 aa11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 LCE6AA0A183 80 aa11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 ZNF705EA8MWA4 302 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 CSNK1G2-AS1Q8NCQ2 148 aa11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 SLC50A1Q9BRV3 221 aa11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 AGRNO00468 2067 aa11.23□□□□□ -0.61
PRPF40B-211ENST00000551063 A8MTW9 85 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms