RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
PTCH1-221ENST00000550914 SLC25A22Q9H936 323 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 HSPG2P98160 4391 aa9.06□□□□□ -0.96
PTCH1-221ENST00000550914 IAPPP10997 89 aa9.06□□□□□ -0.96
PTCH1-221ENST00000550914 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
PTCH1-221ENST00000550914 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.06□□□□□ -0.96
PTCH1-221ENST00000550914 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
PTCH1-221ENST00000550914 OR11H7Q8NGC8 314 aa9.06□□□□□ -0.96
PTCH1-221ENST00000550914 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-221ENST00000550914 SYNGR2O43760 224 aa9.05□□□□□ -0.96
PTCH1-221ENST00000550914 ATG101Q9BSB4 218 aa9.05□□□□□ -0.96
PTCH1-221ENST00000550914 TMEM147Q9BVK8 224 aa9.05□□□□□ -0.96
PTCH1-221ENST00000550914 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
PTCH1-221ENST00000550914 FABP12A6NFH5 140 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 M0R2Z0 102 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 ORM2P19652 201 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 TMBIM6P55061 237 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 AP3S2P59780 193 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 SPINK13Q1W4C9 94 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 TMED4Q7Z7H5 227 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 DEDD2Q8WXF8 326 aa9.04□□□□□ -0.96
PTCH1-221ENST00000550914 SLC25A21Q9BQT8 299 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-221ENST00000550914 TRAV8-2A0A0B4J237 113 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 ZNF705GA8MUZ8 300 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-221ENST00000550914 H3BRN7 92 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 BOLA2-SMG1P6H3BVE0 249 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 WRBO00258 174 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 RPL7P18124 248 aaKnown RBP9.03□□□□□ -0.96
PTCH1-221ENST00000550914 VAMP1P23763 118 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 TNFSF8P32971 234 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 TMEM144Q7Z5S9 345 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
PTCH1-221ENST00000550914 SLIRPQ9GZT3 109 aaKnown RBP9.03□□□□□ -0.96
PTCH1-221ENST00000550914 STRAPQ9Y3F4 350 aaKnown RBP9.03□□□□□ -0.96
PTCH1-221ENST00000550914 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 CBY3A6NI87 242 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 ATP5G1P05496 136 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-221ENST00000550914 ATP5G3P48201 142 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 PLP1P60201 277 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-221ENST00000550914 ACOT7LQ6ZUV0 252 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 S100A7AQ86SG5 101 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 BAP18Q8IXM2 172 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 C6orf223Q8N319 242 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 ZNF738Q8NE65 137 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 TRIM63Q969Q1 353 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-221ENST00000550914 LRP1BQ9NZR2 4599 aa9.02□□□□□ -0.97
PTCH1-221ENST00000550914 A0A087X0K7 114 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 F5H768 121 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 SFT2D2O95562 160 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 CCL18P55774 89 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 TAS2R60P59551 318 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 RAP2BP61225 183 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 SELENOTP62341 195 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 TNP2Q05952 138 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 TOMM5Q8N4H5 51 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 HIGD1AQ9Y241 93 aa9.01□□□□□ -0.97
PTCH1-221ENST00000550914 HYPMO75409 117 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 NUDT3O95989 172 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 PRM2P04554 102 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 IL5P05113 134 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 CXCL3P19876 107 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 AZU1P20160 251 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 UBE2MP61081 183 aaKnown RBP9□□□□□ -0.97
PTCH1-221ENST00000550914 FGL1Q08830 312 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 PPP1R1AQ13522 171 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 IGFL4Q6B9Z1 124 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 ZNF493Q6ZR52 646 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 LINC01587Q99440 93 aa9□□□□□ -0.97
PTCH1-221ENST00000550914 TIMM8BQ9Y5J9 83 aaPredicted RBP9□□□□□ -0.97
PTCH1-221ENST00000550914 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 H3BP45 60 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 HOXB5P09067 269 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 RHOBP62745 196 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 ID3Q02535 119 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-221ENST00000550914 PSG3Q16557 428 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 MCFD2Q8NI22 146 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 LINC00588Q9Y4M8 146 aa8.99□□□□□ -0.97
PTCH1-221ENST00000550914 SMCO3A2RU48 225 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 FNDC10F2Z333 226 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 H3BMQ9 156 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms