RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CD5P06127 495 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 TFPI2P48307 235 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 WFDC3Q8IUB2 231 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 OR8I2Q8N0Y5 310 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 C9orf62Q8N4C0 152 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 FAM24BQ8N5W8 94 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 DCANP1Q8TF63 244 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 GATAD1Q8WUU5 269 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 PFDN5Q99471 154 aa9.74□□□□□ -0.85
RAB5C-206ENST00000550406 PSMG3Q9BT73 122 aaPredicted RBP9.74□□□□□ -0.85
RAB5C-206ENST00000550406 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
RAB5C-206ENST00000550406 HELTA6NFD8 242 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 K7EQG2 157 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 JTBO76095 146 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
RAB5C-206ENST00000550406 DEFA6Q01524 100 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 ZFP69Q49AA0 526 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 MIR17HGQ75NE6 70 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 OR2G3Q8NGZ4 309 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 FAM167A-AS1Q96KT0 104 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
RAB5C-206ENST00000550406 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
RAB5C-206ENST00000550406 TRAV2A0A0B4J234 112 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 EIF3GO75821 320 aaKnown RBP eCLIP9.72□□□□□ -0.85
RAB5C-206ENST00000550406 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
RAB5C-206ENST00000550406 RAB2AP61019 212 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 STXBP6Q8NFX7 210 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
RAB5C-206ENST00000550406 KANTRA0A1W2PQU2 76 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 SOCS3O14543 225 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 SPP1P10451 314 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 M6PRP20645 277 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 CD81P60033 236 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 PAFAH1B2P68402 229 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 SERF2P84101 59 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 GNPNAT1Q96EK6 184 aaPredicted RBP9.71□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF503Q96F45 646 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF471Q9BX82 626 aaPredicted RBP9.71□□□□□ -0.86
RAB5C-206ENST00000550406 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 NRN1Q9NPD7 142 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 UBQLN2Q9UHD9 624 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 FUT9Q9Y231 359 aa9.71□□□□□ -0.86
RAB5C-206ENST00000550406 AGRNO00468 2067 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 A0A087X0K7 114 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 H3BQ15 152 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 DNASE2O00115 360 aaPredicted RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 PFDN1O60925 122 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 SNRPCP09234 159 aaKnown RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 RPL7P18124 248 aaKnown RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 S100A7P31151 101 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 GALR1P47211 349 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 GPR82Q96P67 336 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
RAB5C-206ENST00000550406 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
RAB5C-206ENST00000550406 TRAV8-2A0A0B4J237 113 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 PYYP10082 97 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 RHOBP62745 196 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF124Q15973 351 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 FAM122CQ6P4D5 195 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 SSX7Q7RTT5 188 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 S100A7AQ86SG5 101 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 DEFB125Q8N687 156 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 OR10G9Q8NGN4 311 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 OR10G7Q8NGN6 311 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 STOML3Q8TAV4 291 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF586Q9NXT0 402 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
RAB5C-206ENST00000550406 OR11H12B2RN74 326 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 H3BTX0 84 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF726P1Q15940 193 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 TMEM41BQ5BJD5 291 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
RAB5C-206ENST00000550406 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 TMEM14CQ9P0S9 112 aa9.68□□□□□ -0.86
RAB5C-206ENST00000550406 HMGB3O15347 200 aaKnown RBP9.67□□□□□ -0.86
RAB5C-206ENST00000550406 SEC11BP0C7V7 166 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 ATF4P18848 351 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-206ENST00000550406 HLA-DMBP28068 263 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 DEFB131AP59861 70 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 FXYD5Q96DB9 178 aa9.67□□□□□ -0.86
RAB5C-206ENST00000550406 HRH4Q9H3N8 390 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms