RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SHANK2-AS3Q9BTD1 123 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 MGAT4CQ9UBM8 478 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 HIGD1AQ9Y241 93 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 C7orf66A4D0T2 115 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 A8MTW9 85 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 IGLL5B9A064 214 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 LINC00869P0C866 280 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 RPL7P18124 248 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 RRAS2P62070 204 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 Q6ZTC4 211 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF431Q8TF32 576 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 DOK5Q9P104 306 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 RNF24Q9Y225 148 aa13.42□□□□□ -0.26
CHMP1A-207ENST00000549328 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 TMEM189A5PLL7 270 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 F6UB75 175 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 FXYD7P58549 80 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 PXDC1Q5TGL8 231 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 GSG1LQ6UXU4 331 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 C20orf173Q96LM9 149 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 SLC35B3Q9H1N7 401 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 NUDT15Q9NV35 164 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
CHMP1A-207ENST00000549328 DEDDO75618 318 aa13.4□□□□□ -0.26
CHMP1A-207ENST00000549328 OR5G3P0C626 314 aa13.4□□□□□ -0.26
CHMP1A-207ENST00000549328 C12orf74Q32Q52 190 aa13.4□□□□□ -0.26
CHMP1A-207ENST00000549328 CELA1Q9UNI1 258 aa13.4□□□□□ -0.26
CHMP1A-207ENST00000549328 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.27
CHMP1A-207ENST00000549328 CCSO14618 274 aa13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 ARL16Q0P5N6 197 aa13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 RNF126Q9BV68 326 aa13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 GOLT1BQ9Y3E0 138 aa13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 RFNGQ9Y644 331 aa13.39□□□□□ -0.27
CHMP1A-207ENST00000549328 IGHV3OR16-12A0A075B7B8 117 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 L7N2F9 121 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 GOSR2O14653 212 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 DUSP14O95147 198 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 H2AFB2P0C5Z0 115 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 SPART-AS1P0CW21 52 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 VAMP2P63027 116 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 AMTNQ6UX39 209 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 ZNF546Q86UE3 836 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 C12orf45Q8N5I9 185 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 S100ZQ8WXG8 99 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 UHRF2Q96PU4 802 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 SEC22CQ9BRL7 303 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 ARL6Q9H0F7 186 aa13.38□□□□□ -0.27
CHMP1A-207ENST00000549328 A0A087X0K7 114 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 C5orf51A6NDU8 294 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 AGPAT2O15120 278 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 AMBPP02760 352 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 FGL1Q08830 312 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 SLC38A11Q08AI6 406 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 C1orf158Q8N1D5 194 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 C2orf50Q96LR7 162 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 ARV1Q9H2C2 271 aa13.37□□□□□ -0.27
CHMP1A-207ENST00000549328 IGHV4-4A0A075B6R2 117 aa13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 CNN1P51911 297 aaKnown RBP13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 MZT2BQ6NZ67 158 aa13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 IGF2BP2-AS1Q96M15 143 aa13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
CHMP1A-207ENST00000549328 HBE1P02100 147 aa13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 PVALBP20472 110 aaPredicted RBP13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 IGFL4Q6B9Z1 124 aa13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 ZNF767PQ75MW2 155 aa13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 RNF182Q8N6D2 247 aa13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 C11orf1Q9H5F2 150 aa13.35□□□□□ -0.27
CHMP1A-207ENST00000549328 KMT2AQ03164 3969 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 MRPS12O15235 138 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 CXCL3P19876 107 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 BCAP31P51572 246 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 CAV2P51636 162 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 EMP1P54849 157 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 PRR20EP86478 221 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 PRR20CP86479 221 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 PRR20DP86480 221 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 PRR20BP86481 221 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 PRR20AP86496 221 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 IL15RAQ13261 267 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 ASAH1Q13510 395 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 RAB31Q13636 194 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 RRN3P1Q2M238 152 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 LINC00305Q7Z4B0 112 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 OR11H7Q8NGC8 314 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 LRRC20Q8TCA0 184 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 MGST2Q99735 147 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 DKK2Q9UBU2 259 aa13.34□□□□□ -0.27
CHMP1A-207ENST00000549328 CXCL2P19875 107 aa13.33□□□□□ -0.28
CHMP1A-207ENST00000549328 PSG3Q16557 428 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms