RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 F6UB75 175 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 HYPMO75409 117 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 S100A10P60903 97 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 FGL1Q08830 312 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 LINC00299Q6ZSB3 139 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 C12orf45Q8N5I9 185 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-203ENST00000549131 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 HRH4Q9H3N8 390 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 NPVFQ9HCQ7 196 aa10.63□□□□□ -0.71
LINC00661-203ENST00000549131 IGHV3OR16-12A0A075B7B8 117 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 ELOA3CA0A087WX78 387 aaPredicted RBP10.62□□□□□ -0.71
LINC00661-203ENST00000549131 K7EPK0 472 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 BCAP31P51572 246 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 CAV2P51636 162 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 FAM78BQ5VT40 261 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 SPATA31B1PQ5VZV4 182 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF546Q86UE3 836 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 ARL6Q9H0F7 186 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
LINC00661-203ENST00000549131 A0A0J9YX75 114 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
LINC00661-203ENST00000549131 ARL16Q0P5N6 197 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 ASAH1Q13510 395 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 Q6ZTC4 211 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 RNF182Q8N6D2 247 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 ENKURQ8TC29 256 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
LINC00661-203ENST00000549131 C11orf94C9JXX5 98 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 GOSR2O14653 212 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 AGPAT2O15120 278 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 PVALBP20472 110 aaPredicted RBP10.6□□□□□ -0.71
LINC00661-203ENST00000549131 PLP1P60201 277 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 PSG9Q00887 426 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 IGFL4Q6B9Z1 124 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 C2orf50Q96LR7 162 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 GGACTQ9BVM4 153 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 ARV1Q9H2C2 271 aa10.6□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
LINC00661-203ENST00000549131 IGLL5B9A064 214 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 DEDDO75618 318 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 CST7O76096 145 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF705AQ6ZN79 300 aaPredicted RBP10.59□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 ZNF738Q8NE65 137 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 MGST2Q99735 147 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 PTTG2Q9NZH5 202 aa10.59□□□□□ -0.71
LINC00661-203ENST00000549131 TRAV8-2A0A0B4J237 113 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 TRAV10A0A0B4J240 114 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 FAM24AA6NFZ4 105 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 UPK1BO75841 260 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 EMP1P54849 157 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 PXDC1Q5TGL8 231 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 PATE2Q6UY27 113 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 STX12Q86Y82 276 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 GOLT1BQ9Y3E0 138 aa10.58□□□□□ -0.72
LINC00661-203ENST00000549131 A0A087X0K7 114 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 UBE2L5PA0A1B0GUS4 154 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 A6NHS1 94 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 CAMLGP49069 296 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 CNN1P51911 297 aaKnown RBP10.57□□□□□ -0.72
LINC00661-203ENST00000549131 RAB32Q13637 225 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 LINC00305Q7Z4B0 112 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 NEU1Q99519 415 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 GPN1Q9HCN4 374 aaPredicted RBP10.57□□□□□ -0.72
LINC00661-203ENST00000549131 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
LINC00661-203ENST00000549131 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
LINC00661-203ENST00000549131 IGSF23A1L1A6 192 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 TMEM189A5PLL7 270 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 DUSP14O95147 198 aaKnown RBP10.56□□□□□ -0.72
LINC00661-203ENST00000549131 SULT1A1P50225 295 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 TCTAP57738 103 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 BAXQ07812 192 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 RAB31Q13636 194 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 C10orf113Q5VZT2 155 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
LINC00661-203ENST00000549131 TMEM208Q9BTX3 173 aa10.56□□□□□ -0.72
LINC00661-203ENST00000549131 A8MTW9 85 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 M0R2Z0 102 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 INSP01308 110 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 HBE1P02100 147 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 CXCL3P19876 107 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 HBG1P69891 147 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 HBG2P69892 147 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms