RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 DEFB114Q30KQ6 69 aa12.94□□□□□ -0.34
KRT4-201ENST00000548097 CD300EQ496F6 205 aaPredicted RBP12.94□□□□□ -0.34
KRT4-201ENST00000548097 GLMPQ8WWB7 406 aa12.94□□□□□ -0.34
KRT4-201ENST00000548097 SLC25A2Q9BXI2 301 aa12.94□□□□□ -0.34
KRT4-201ENST00000548097 A0A1W2PPV4 95 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 H3BTX0 84 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
KRT4-201ENST00000548097 TCF24Q7RTU0 167 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 GBGT1Q8N5D6 347 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 FAM213BQ8TBF2 198 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 MARC2Q969Z3 335 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
KRT4-201ENST00000548097 A0A1W2PS18 150 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 PYYP10082 97 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 RHOBP62745 196 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 FAM167A-AS1Q96KT0 104 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 A0A1B0GV50 99 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 MBP02144 154 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 TFPI2P48307 235 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 PRR31Q5SQ13 230 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
KRT4-201ENST00000548097 IGLV1-51P01701 117 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 OR10J4P0C629 311 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
KRT4-201ENST00000548097 C9orf66Q5T8R8 295 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 FAM90A2PQ658T7 463 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
KRT4-201ENST00000548097 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 WFDC3Q8IUB2 231 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 PCNPQ8WW12 178 aaKnown RBP12.91□□□□□ -0.34
KRT4-201ENST00000548097 ZNF503Q96F45 646 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 C17orf77Q96MU5 243 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
KRT4-201ENST00000548097 OR7C2O60412 319 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 MRPL32Q9BYC8 188 aaKnown RBP12.9□□□□□ -0.34
KRT4-201ENST00000548097 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
KRT4-201ENST00000548097 PFDN2Q9UHV9 154 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 G3V4G9 280 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 MRPS12O15235 138 aaKnown RBP12.9□□□□□ -0.34
KRT4-201ENST00000548097 PRB4P10163 310 aaPredicted RBP12.9□□□□□ -0.34
KRT4-201ENST00000548097 SULT1A2P50226 295 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 STXBP6Q8NFX7 210 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
KRT4-201ENST00000548097 UMAD1C9J7I0 102 aa12.89□□□□□ -0.35
KRT4-201ENST00000548097 H3BQ15 152 aa12.89□□□□□ -0.35
KRT4-201ENST00000548097 GP9P14770 177 aa12.89□□□□□ -0.35
KRT4-201ENST00000548097 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
KRT4-201ENST00000548097 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
KRT4-201ENST00000548097 PHYHIPLQ96FC7 376 aa12.89□□□□□ -0.35
KRT4-201ENST00000548097 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
KRT4-201ENST00000548097 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 BMI1P35226 326 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 BPIFA4PQ86YQ2 179 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 MCRIP2Q9BUT9 160 aaKnown RBP12.88□□□□□ -0.35
KRT4-201ENST00000548097 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 TMPRSS5Q9H3S3 457 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 ZNF785A8K8V0 405 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
KRT4-201ENST00000548097 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
KRT4-201ENST00000548097 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 S100A7AQ86SG5 101 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
KRT4-201ENST00000548097 S100A7P31151 101 aa12.87□□□□□ -0.35
KRT4-201ENST00000548097 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
KRT4-201ENST00000548097 FAM24BQ8N5W8 94 aa12.87□□□□□ -0.35
KRT4-201ENST00000548097 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
KRT4-201ENST00000548097 ZNF586Q9NXT0 402 aa12.87□□□□□ -0.35
KRT4-201ENST00000548097 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 HELTA6NFD8 242 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 IGLC2P0DOY2 106 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
KRT4-201ENST00000548097 GALR1P47211 349 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 RNF141Q8WVD5 230 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
KRT4-201ENST00000548097 SLC17A3O00476 420 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 INSL3P51460 131 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 TAS2R45P59539 299 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
KRT4-201ENST00000548097 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
KRT4-201ENST00000548097 TSPAN4O14817 238 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 H2AFB1P0C5Y9 115 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 GPR82Q96P67 336 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 NRN1Q9NPD7 142 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
KRT4-201ENST00000548097 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms