RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 GCSAMLQ5JQS6 135 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 GTSCR1Q86UQ5 136 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 GPR82Q96P67 336 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 MS4A6AQ9H2W1 248 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 TFPI2P48307 235 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 TMUB2Q71RG4 321 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 STXBP6Q8NFX7 210 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 GNPNAT1Q96EK6 184 aaPredicted RBP17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 PSMG3Q9BT73 122 aaPredicted RBP17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 SLC25A32Q9H2D1 315 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 RFNGQ9Y644 331 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 DNAH3Q8TD57 4116 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 BCL2L11O43521 198 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 PFDN1O60925 122 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 GALR1P47211 349 aa17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 LGALSLQ3ZCW2 172 aaPredicted RBP17.36■□□□□ 0.37
SMARCD1-203ENST00000547247 RPL7P18124 248 aaKnown RBP17.35■□□□□ 0.37
SMARCD1-203ENST00000547247 WFDC3Q8IUB2 231 aa17.35■□□□□ 0.37
SMARCD1-203ENST00000547247 TRAV2A0A0B4J234 112 aa17.34■□□□□ 0.37
SMARCD1-203ENST00000547247 CD81P60033 236 aa17.34■□□□□ 0.37
SMARCD1-203ENST00000547247 FAM78BQ5VT40 261 aa17.34■□□□□ 0.37
SMARCD1-203ENST00000547247 MORN5Q5VZ52 161 aa17.34■□□□□ 0.37
SMARCD1-203ENST00000547247 NRN1Q9NPD7 142 aa17.34■□□□□ 0.37
SMARCD1-203ENST00000547247 CD7P09564 240 aa17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 SERF2P84101 59 aa17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 ACOT6Q3I5F7 207 aaPredicted RBP17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 OR2G3Q8NGZ4 309 aa17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 ZNF471Q9BX82 626 aaPredicted RBP17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 SH3BGRL3Q9H299 93 aa17.33■□□□□ 0.37
SMARCD1-203ENST00000547247 M6PRP20645 277 aa17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 BPIFA4PQ86YQ2 179 aa17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 Q8N1Y9 231 aa17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 DCANP1Q8TF63 244 aa17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 SEPSECSQ9HD40 501 aaKnown RBP17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 MRPL32Q9BYC8 188 aaKnown RBP17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 SMAD5-AS1Q9Y6J3 95 aa17.32■□□□□ 0.36
SMARCD1-203ENST00000547247 K7EQG2 157 aa17.31■□□□□ 0.36
SMARCD1-203ENST00000547247 TRAV5A0A0B4J249 113 aa17.3■□□□□ 0.36
SMARCD1-203ENST00000547247 K7EIL1 84 aa17.3■□□□□ 0.36
SMARCD1-203ENST00000547247 ATF4P18848 351 aaPredicted RBP17.3■□□□□ 0.36
SMARCD1-203ENST00000547247 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
SMARCD1-203ENST00000547247 FUT9Q9Y231 359 aa17.3■□□□□ 0.36
SMARCD1-203ENST00000547247 MBP02144 154 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 MEOX2P50222 304 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 CMC4P56277 68 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 RHOBP62745 196 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 SPATA31B1PQ5VZV4 182 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 MIR17HGQ75NE6 70 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 C9orf62Q8N4C0 152 aa17.29■□□□□ 0.36
SMARCD1-203ENST00000547247 MRPS12O15235 138 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 RAB2AP61019 212 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 OR10G4Q8NGN3 311 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 OR10G9Q8NGN4 311 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 OR10G7Q8NGN6 311 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 FAM110AQ9BQ89 295 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 OR11H12B2RN74 326 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 SPP1P10451 314 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 ODF3L2Q3SX64 289 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 FAM24BQ8N5W8 94 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 C19orf73Q9NVV2 129 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 UBQLN2Q9UHD9 624 aa17.28■□□□□ 0.36
SMARCD1-203ENST00000547247 A0A1W2PPV4 95 aa17.27■□□□□ 0.35
SMARCD1-203ENST00000547247 C4BPBP20851 252 aa17.27■□□□□ 0.35
SMARCD1-203ENST00000547247 SAMD13Q5VXD3 122 aa17.27■□□□□ 0.35
SMARCD1-203ENST00000547247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.27■□□□□ 0.35
SMARCD1-203ENST00000547247 C17orf77Q96MU5 243 aa17.27■□□□□ 0.35
SMARCD1-203ENST00000547247 A0A087X0K7 114 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 TPT1P13693 172 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 SNRPD3P62318 126 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 BAP18Q8IXM2 172 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 MRAPQ8TCY5 172 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 SLC25A2Q9BXI2 301 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 MAP6D1Q9H9H5 199 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 TMEM14CQ9P0S9 112 aa17.26■□□□□ 0.35
SMARCD1-203ENST00000547247 ZNF688P0C7X2 276 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 ID1P41134 155 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 TAS2R45P59539 299 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 TMEM41BQ5BJD5 291 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 DEFB121Q5J5C9 76 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 FAM122CQ6P4D5 195 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 RPP25LQ8N5L8 163 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 STOML3Q8TAV4 291 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 FAM167A-AS1Q96KT0 104 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 WFDC10AQ9H1F0 79 aa17.25■□□□□ 0.35
SMARCD1-203ENST00000547247 SOCS3O14543 225 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 SEC11BP0C7V7 166 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 NKX2-5P52952 324 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 AKR1C8PQ5T2L2 129 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 DEFB125Q8N687 156 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 C16orf92Q96LL3 132 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 HRH4Q9H3N8 390 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 RPRMQ9NS64 109 aa17.24■□□□□ 0.35
SMARCD1-203ENST00000547247 ISLRO14498 428 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 IGLC2P0DOY2 106 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 CDC34P49427 236 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 PSMB3P49720 205 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 DEFB131AP59861 70 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 SLC51BQ86UW2 128 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 LRRC20Q8TCA0 184 aa17.23■□□□□ 0.35
SMARCD1-203ENST00000547247 OR51M1Q9H341 326 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms