RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RSG1Q9BU20 258 aa8.77□□□□□ -1.01
COPS7A-221ENST00000546229 MAGT1Q9H0U3 335 aa8.77□□□□□ -1.01
COPS7A-221ENST00000546229 FAT1Q14517 4588 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 PMS2P5A8MQ11 134 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 MRPS12O15235 138 aaKnown RBP8.76□□□□□ -1.01
COPS7A-221ENST00000546229 CFDP00746 253 aaPredicted RBP8.76□□□□□ -1.01
COPS7A-221ENST00000546229 INSP01308 110 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 ACOT7LQ6ZUV0 252 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 OR1B1Q8NGR6 318 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 MRPS26Q9BYN8 205 aaKnown RBP8.76□□□□□ -1.01
COPS7A-221ENST00000546229 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
COPS7A-221ENST00000546229 TRAV12-2A0A075B6T6 113 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 A0A087X0K7 114 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 BOLA2-SMG1P6H3BVE0 249 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 ANXA3P12429 323 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 TNFSF8P32971 234 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 PLP1P60201 277 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 RAB11AP62491 216 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 FCN2Q15485 313 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 TMEM128Q5BJH2 165 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 GGNBP1Q5YKI7 109 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 C6orf223Q8N319 242 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 RNASE8Q8TDE3 154 aaKnown RBP8.75□□□□□ -1.01
COPS7A-221ENST00000546229 RNF141Q8WVD5 230 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 PPP1R14BQ96C90 147 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 GPR82Q96P67 336 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 SCGB3A2Q96PL1 93 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 SLC25A39Q9BZJ4 359 aaPredicted RBP8.75□□□□□ -1.01
COPS7A-221ENST00000546229 MCUBQ9NWR8 336 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 RSL24D1Q9UHA3 163 aaKnown RBP8.75□□□□□ -1.01
COPS7A-221ENST00000546229 V9GYH0 126 aa8.75□□□□□ -1.01
COPS7A-221ENST00000546229 C16orf90A8MZG2 172 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 SYNGR2O43760 224 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
COPS7A-221ENST00000546229 CXCL3P19876 107 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 PPP1R1AQ13522 171 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 GPR141Q7Z602 305 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 BPIFCQ8NFQ6 507 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 RAB2BQ8WUD1 216 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 BCL7BQ9BQE9 202 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 TMED3Q9Y3Q3 217 aa8.74□□□□□ -1.01
COPS7A-221ENST00000546229 H3BP45 60 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 CCNKO75909 580 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 SFT2D2O95562 160 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 DEFB130BP0DP73 79 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 DEFB130AP0DP74 79 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 ORM2P19652 201 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 OR8A1Q8NGG7 326 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 CIB3Q96Q77 187 aaPredicted RBP8.73□□□□□ -1.01
COPS7A-221ENST00000546229 TMEM208Q9BTX3 173 aa8.73□□□□□ -1.01
COPS7A-221ENST00000546229 CBY3A6NI87 242 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 H3BMQ9 156 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 K7EPK0 472 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 WRBO00258 174 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
COPS7A-221ENST00000546229 TMBIM6P55061 237 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 B2MP61769 119 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 KIR3DS1Q14943 382 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 PATE2Q6UY27 113 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 CYP2G1PQ6ZSU1 146 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 ZBTB8BQ8NAP8 495 aaPredicted RBP8.72□□□□□ -1.01
COPS7A-221ENST00000546229 UHRF2Q96PU4 802 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 TMEM147Q9BVK8 224 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
COPS7A-221ENST00000546229 PIGBOS1A0A0B4J2F0 54 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 F5H768 121 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 MED6O75586 246 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 ATP5G1P05496 136 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 VAMP1P23763 118 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 ATP5G3P48201 142 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 TAS2R60P59551 318 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 KRTAP10-2P60368 255 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 ID3Q02535 119 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 AKR1C1Q04828 323 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 Q8N1X5 172 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 TMEM256Q8N2U0 113 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 ZNF738Q8NE65 137 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
COPS7A-221ENST00000546229 FABP12A6NFH5 140 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 ADAP1O75689 374 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 NUDT3O95989 172 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 HOXB5P09067 269 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 LINC00869P0C866 280 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
COPS7A-221ENST00000546229 HOXA5P20719 270 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
COPS7A-221ENST00000546229 PSG3Q16557 428 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 TMEM14EPQ6UXP3 125 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
COPS7A-221ENST00000546229 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 Q9H3A6 140 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms