RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 GGNBP1Q5YKI7 109 aa11.6□□□□□ -0.55
CPSF7-225ENST00000545934 TMEM182Q6ZP80 229 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-225ENST00000545934 GPR82Q96P67 336 aa11.6□□□□□ -0.55
CPSF7-225ENST00000545934 SLC25A22Q9H936 323 aa11.6□□□□□ -0.55
CPSF7-225ENST00000545934 ANKRD20A5PA0PJZ0 165 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 AKR1C4P17516 323 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 RAB11AP62491 216 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 SSX7Q7RTT5 188 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 CLVS1Q8IUQ0 354 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-225ENST00000545934 RNF182Q8N6D2 247 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 OR1S1Q8NH92 325 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 Q9H8V8 135 aa11.59□□□□□ -0.55
CPSF7-225ENST00000545934 TRAV12-2A0A075B6T6 113 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 BOLA2-SMG1P6H3BVE0 249 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 CTDSP2O14595 271 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
CPSF7-225ENST00000545934 KRTAP10-2P60368 255 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 SRPXP78539 464 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 TMEM256Q8N2U0 113 aa11.58□□□□□ -0.56
CPSF7-225ENST00000545934 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-225ENST00000545934 TAS2R60P59551 318 aa11.57□□□□□ -0.56
CPSF7-225ENST00000545934 C16orf74Q96GX8 76 aa11.57□□□□□ -0.56
CPSF7-225ENST00000545934 SCGB3A2Q96PL1 93 aa11.57□□□□□ -0.56
CPSF7-225ENST00000545934 SLC25A39Q9BZJ4 359 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-225ENST00000545934 Q9H3A6 140 aa11.57□□□□□ -0.56
CPSF7-225ENST00000545934 VPS13BQ7Z7G8 4022 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 H3BRN7 92 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 RGS5O15539 181 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 IAPPP10997 89 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 ORM2P19652 201 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 LINC00612Q8N6U2 182 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 BPIFCQ8NFQ6 507 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 RNASE8Q8TDE3 154 aaKnown RBP11.56□□□□□ -0.56
CPSF7-225ENST00000545934 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 SCP2D1Q9UJQ7 156 aa11.56□□□□□ -0.56
CPSF7-225ENST00000545934 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-225ENST00000545934 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 SLC25A6P12236 298 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 ANXA3P12429 323 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 CLINT1Q14677 625 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 LRTM2Q8N967 370 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 LINC01587Q99440 93 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-225ENST00000545934 RABL2BQ9UNT1 228 aa11.55□□□□□ -0.56
CPSF7-225ENST00000545934 FAT1Q14517 4588 aa11.54□□□□□ -0.56
CPSF7-225ENST00000545934 CXCL3P19876 107 aa11.54□□□□□ -0.56
CPSF7-225ENST00000545934 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
CPSF7-225ENST00000545934 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
CPSF7-225ENST00000545934 SHANK2-AS3Q9BTD1 123 aa11.54□□□□□ -0.56
CPSF7-225ENST00000545934 A0A087X0K7 114 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 SMIM18P0DKX4 95 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 S100A7P31151 101 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 IL18Q14116 193 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
CPSF7-225ENST00000545934 CIB3Q96Q77 187 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-225ENST00000545934 NOP10Q9NPE3 64 aaKnown RBP11.53□□□□□ -0.56
CPSF7-225ENST00000545934 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 SYNGR2O43760 224 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 MED6O75586 246 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 RPL7P18124 248 aaKnown RBP11.52□□□□□ -0.57
CPSF7-225ENST00000545934 HOXA5P20719 270 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 PLP1P60201 277 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-225ENST00000545934 FGL1Q08830 312 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 PSG3Q16557 428 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 ESRGQ1W209 222 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 GNPNAT1Q96EK6 184 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-225ENST00000545934 DIRAS2Q96HU8 199 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 UHRF2Q96PU4 802 aa11.52□□□□□ -0.57
CPSF7-225ENST00000545934 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
CPSF7-225ENST00000545934 H3BNG1 76 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 MRPS12O15235 138 aaKnown RBP11.51□□□□□ -0.57
CPSF7-225ENST00000545934 M6PRP20645 277 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 CDKN1BP46527 198 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 RHOBP62745 196 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
CPSF7-225ENST00000545934 SPCS2Q15005 226 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 ACOT7LQ6ZUV0 252 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 MCUBQ9NWR8 336 aa11.51□□□□□ -0.57
CPSF7-225ENST00000545934 MRPS16Q9Y3D3 137 aaKnown RBP11.51□□□□□ -0.57
CPSF7-225ENST00000545934 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-225ENST00000545934 WRBO00258 174 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 HTN1P15515 57 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 Q6ZRN7 208 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-225ENST00000545934 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 SOSTQ9BQB4 213 aa11.5□□□□□ -0.57
CPSF7-225ENST00000545934 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms