RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 TPSG1Q9NRR2 321 aa9.16□□□□□ -0.94
DDB1-224ENST00000545894 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
DDB1-224ENST00000545894 DOPEY1Q5JWR5 2465 aa9.16□□□□□ -0.94
DDB1-224ENST00000545894 CD24P25063 80 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 RUSC1-AS1Q66K80 236 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 PVRIGQ6DKI7 326 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 HCP5Q6MZN7 132 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 LHFPL4Q7Z7J7 247 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.94
DDB1-224ENST00000545894 Q9H3A6 140 aa9.15□□□□□ -0.94
DDB1-224ENST00000545894 IGHV2-70DA0A0C4DH43 119 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 FAM231BA6NCW3 169 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 K7EP13 123 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 CHEK1O14757 476 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 FCN3O75636 299 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 MC5RP33032 325 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 FBLN7Q53RD9 439 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.95
DDB1-224ENST00000545894 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 TMEM191AQ9H0A3 160 aa9.15□□□□□ -0.95
DDB1-224ENST00000545894 DYSFO75923 2080 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 LOC102724200A0A096LPH7 203 aaPredicted RBP9.14□□□□□ -0.95
DDB1-224ENST00000545894 C17orf100A8MU93 164 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 LIPFP07098 398 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 OR5AL1P0C617 328 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 LGALS7P47929 136 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 ZNF137PP52743 207 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 LRRC10Q5BKY1 277 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 UTP20O75691 2785 aaKnown RBP9.14□□□□□ -0.95
DDB1-224ENST00000545894 PPIAL4EA0A075B759 164 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 NPIPB6E9PJ23 425 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 PPIAL4DF5H284 164 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 H3BTX0 84 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 NDUFB3O43676 98 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 PPIAL4FP0DN26 164 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 COX6B1P14854 86 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 C8orf46Q8TAG6 207 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 RITA1Q96K30 269 aa9.14□□□□□ -0.95
DDB1-224ENST00000545894 GCN1Q92616 2671 aaKnown RBP9.13□□□□□ -0.95
DDB1-224ENST00000545894 LOC105371242A0A075B767 164 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 HSBP1L1C9JCN9 74 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 ENSAO43768 121 aaKnown RBP9.13□□□□□ -0.95
DDB1-224ENST00000545894 CD3EP07766 207 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 PLP1P60201 277 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 RBX1P62877 108 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 HIST2H2BCQ6DN03 193 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 SLC25A34Q6PIV7 304 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 Q86TA4 180 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
DDB1-224ENST00000545894 HELZ2Q9BYK8 2649 aaKnown RBP9.12□□□□□ -0.95
DDB1-224ENST00000545894 TMEM178BH3BS89 294 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 HAX1O00165 279 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
DDB1-224ENST00000545894 PET117Q6UWS5 81 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
DDB1-224ENST00000545894 A0A1W2PPR1 153 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 VAMP3Q15836 100 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 ADIPOQQ15848 244 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 HIGD1AQ9Y241 93 aa9.12□□□□□ -0.95
DDB1-224ENST00000545894 TRAV30A0A087WSZ9 112 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 IGHV3-21A0A0B4J1V1 117 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 IGHV3-72A0A0B4J1Y9 119 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 NUDT3O95989 172 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 APOHP02749 345 aaPredicted RBP9.11□□□□□ -0.95
DDB1-224ENST00000545894 DLX6P56179 175 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 PAX2Q02962 417 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 LYPD2Q6UXB3 125 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 CIARTQ8N365 385 aaPredicted RBP9.11□□□□□ -0.95
DDB1-224ENST00000545894 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 E7EQL1 145 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 BVES-AS1Q5T3Y7 98 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 CCL17Q92583 94 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
DDB1-224ENST00000545894 TNFRSF13BO14836 293 aaPredicted RBP9.1□□□□□ -0.95
DDB1-224ENST00000545894 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 APELAP0DMC3 54 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 HTR1DP28221 377 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 ZNF138P52744 262 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 ZNF672Q499Z4 452 aaPredicted RBP9.1□□□□□ -0.95
DDB1-224ENST00000545894 C16orf54Q6UWD8 224 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 C12orf54Q6X4T0 127 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 MS4A6AQ9H2W1 248 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
DDB1-224ENST00000545894 NBPF19A0A087WUL8 3843 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 TRBV6-1A0A0K0K1D8 114 aa9.1□□□□□ -0.95
DDB1-224ENST00000545894 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms