RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MGST2Q99735 147 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 SAV1Q9H4B6 383 aaPredicted RBP8.31□□□□□ -1.08
YBX3-216ENST00000544622 SLC25A22Q9H936 323 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 DOK5Q9P104 306 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 WDR83OSQ9Y284 106 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 H0YIZ8 118 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 ID1P41134 155 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 GALR1P47211 349 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 BCAP31P51572 246 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 DEFB1P60022 68 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 PRR20EP86478 221 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 PRR20CP86479 221 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 PRR20DP86480 221 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 PRR20BP86481 221 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 PRR20AP86496 221 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 FOXI2Q6ZQN5 318 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 ZNF546Q86UE3 836 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 C20orf173Q96LM9 149 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 UHRF2Q96PU4 802 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 RSG1Q9BU20 258 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 SCRT1Q9BWW7 348 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 HIGD1AQ9Y241 93 aa8.3□□□□□ -1.08
YBX3-216ENST00000544622 A8MTW9 85 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 GOSR2O14653 212 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 S100A10P60903 97 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 RAP2BP61225 183 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 TMEM217Q8N7C4 229 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 Q8NAQ8 132 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 ARL6Q9H0F7 186 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 C11orf68Q9H3H3 251 aaKnown RBP8.29□□□□□ -1.08
YBX3-216ENST00000544622 UQCC1Q9NVA1 299 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 X6R8D5 127 aa8.29□□□□□ -1.08
YBX3-216ENST00000544622 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
YBX3-216ENST00000544622 A0A087X0K7 114 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 LCE6AA0A183 80 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 OR5G3P0C626 314 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 RPL7P18124 248 aaKnown RBP8.28□□□□□ -1.08
YBX3-216ENST00000544622 RPL29P47914 159 aaKnown RBP8.28□□□□□ -1.08
YBX3-216ENST00000544622 CAMLGP49069 296 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 NUTF2P61970 127 aaKnown RBP8.28□□□□□ -1.08
YBX3-216ENST00000544622 CYCSP99999 105 aaKnown RBP8.28□□□□□ -1.08
YBX3-216ENST00000544622 NHLH2Q02577 135 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 MORN5Q5VZ52 161 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 SPATA31B1PQ5VZV4 182 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 STX12Q86Y82 276 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 ZNF709Q8N972 641 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 RNF126Q9BV68 326 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 CLEC5AQ9NY25 188 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 OR5AC2Q9NZP5 309 aa8.28□□□□□ -1.08
YBX3-216ENST00000544622 A0A0J9YX75 114 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 E5RGE8 158 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 F6UB75 175 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 RBMY1A1P0DJD3 496 aaKnown RBP8.27□□□□□ -1.09
YBX3-216ENST00000544622 RBMY1CP0DJD4 496 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 MIFP14174 115 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 HBG1P69891 147 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 HBG2P69892 147 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 RBMY1FQ15415 496 aaKnown RBP8.27□□□□□ -1.09
YBX3-216ENST00000544622 S100A7AQ86SG5 101 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 PPP1R1CQ8WVI7 109 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 RPRMQ9NS64 109 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 RNF24Q9Y225 148 aa8.27□□□□□ -1.09
YBX3-216ENST00000544622 RLN2P04090 185 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 CXCL3P19876 107 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 RAB31Q13636 194 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 OPCMLQ14982 345 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 FAM78BQ5VT40 261 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 MIC13Q5XKP0 118 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 AMTNQ6UX39 209 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
YBX3-216ENST00000544622 Q6ZRG5 221 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 DNAJC4Q9NNZ3 241 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 XCL2Q9UBD3 114 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
YBX3-216ENST00000544622 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 MPDU1O75352 247 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 MPC2O95563 127 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 PTTG1O95997 202 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 ZNF705DP0CH99 300 aaPredicted RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 ZNF705BP0CI00 300 aaPredicted RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 CXCL2P19875 107 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 BAXQ07812 192 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 LRRC37A5PQ49AS3 106 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 C10orf113Q5VZT2 155 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 SAT2Q96F10 170 aaPredicted RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 NEU1Q99519 415 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 NPCDR1Q9BY65 106 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms