RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SPATA31B1PQ5VZV4 182 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 Q6ZTC4 211 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 NEU1Q99519 415 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TMEM147Q9BVK8 224 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SLC35B3Q9H1N7 401 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 NPVFQ9HCQ7 196 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PKD1P98161 4303 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 HYPMO75409 117 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 DEDDO75618 318 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SCGB1D2O95969 90 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 LINC00869P0C866 280 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 FXYD7P58549 80 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SELENOTP62341 195 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IL15RAQ13261 267 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 FAM78BQ5VT40 261 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF431Q8TF32 576 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 GPR82Q96P67 336 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 NUDT15Q9NV35 164 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 DOK5Q9P104 306 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
TNFRSF1A-215ENST00000543359 MRPS12O15235 138 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 H2AFB2P0C5Z0 115 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TCTAP57738 103 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PRR20EP86478 221 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PRR20CP86479 221 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PRR20DP86480 221 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PRR20BP86481 221 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PRR20AP86496 221 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PSG9Q00887 426 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 OR10P1Q8NGE3 313 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 UHRF2Q96PU4 802 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
TNFRSF1A-215ENST00000543359 A6NHS1 94 aa9.39□□□□□ -0.91
TNFRSF1A-215ENST00000543359 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
TNFRSF1A-215ENST00000543359 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
TNFRSF1A-215ENST00000543359 C12orf45Q8N5I9 185 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-215ENST00000543359 A0A087X0K7 114 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 TRAV10A0A0B4J240 114 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 FAM240BA0A1B0GVZ2 78 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 SMIM9A6NGZ8 99 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 IGLL5B9A064 214 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 AGPAT2O15120 278 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 S100A7P31151 101 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 RAP2BP61225 183 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ASAH1Q13510 395 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 RNF182Q8N6D2 247 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 TMEM37Q8WXS4 190 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 MGST2Q99735 147 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
TNFRSF1A-215ENST00000543359 FAM25EA8MYX2 175 aa9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 OR5G3P0C626 314 aa9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 IFITM3Q01628 133 aa9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
TNFRSF1A-215ENST00000543359 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 C5orf51A6NDU8 294 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 FAM24AA6NFZ4 105 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 CXCL3P19876 107 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ZNF846Q147U1 533 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 VWC2Q2TAL6 325 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 ZNF546Q86UE3 836 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 OR11H7Q8NGC8 314 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 S100ZQ8WXG8 99 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 RNF126Q9BV68 326 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 LSM5Q9Y4Y9 91 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 DNAH11Q96DT5 4516 aa9.36□□□□□ -0.91
TNFRSF1A-215ENST00000543359 IGHV4-4A0A075B6R2 117 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 L7N2F9 121 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 GOSR2O14653 212 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 CST7O76096 145 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 VAMP2P63027 116 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 FGL1Q08830 312 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
TNFRSF1A-215ENST00000543359 IGF2BP2-AS1Q96M15 143 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms