RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 UBL5Q9BZL1 73 aa16.05■□□□□ 0.16
HDAC4-215ENST00000543185 IGKV3D-20A0A0C4DH25 116 aa16.05■□□□□ 0.16
HDAC4-215ENST00000543185 SRSF8Q9BRL6 282 aaKnown RBP16.05■□□□□ 0.16
HDAC4-215ENST00000543185 IGHG4P01861 327 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 C1QCP02747 245 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 PAX8Q06710 450 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 TMEM141Q96I45 108 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 PTPRQQ9UMZ3 2332 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV3-66A0A0C4DH42 116 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 OR11H6Q8NGC7 330 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 RNF5Q99942 180 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV3OR16-13A0A075B7E8 117 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV3-74A0A0B4J1X5 117 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 CHCHD5Q9BSY4 110 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 CELA2AP08217 269 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 FAM168AQ92567 244 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 VDAC2P45880 294 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-215ENST00000543185 ZNF138P52744 262 aa16.04■□□□□ 0.16
HDAC4-215ENST00000543185 PRRC2AP48634 2157 aaKnown RBP16.04■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV1-24A0A0C4DH33 117 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 PYYP10082 97 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 C9JAW5 83 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 C3orf79P0CE67 100 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 IL9P15248 144 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 DEPPQ9NTK1 212 aa16.03■□□□□ 0.16
HDAC4-215ENST00000543185 RPL32P62910 135 aaKnown RBP16.03■□□□□ 0.16
HDAC4-215ENST00000543185 MBNL3Q9NUK0 354 aaKnown RBP16.03■□□□□ 0.16
HDAC4-215ENST00000543185 LY6G5BQ8NDX9 201 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 IGLV3-32A0A0A0MS00 114 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 SRSF2Q01130 221 aaKnown RBP16.02■□□□□ 0.16
HDAC4-215ENST00000543185 PCNX3Q9H6A9 2034 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 IGHV3-35A0A0C4DH35 117 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.16
HDAC4-215ENST00000543185 LHFPL1Q86WI0 220 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 TMEM75Q8N9X5 138 aa16.02■□□□□ 0.16
HDAC4-215ENST00000543185 SONP18583 2426 aaKnown RBP16.02■□□□□ 0.15
HDAC4-215ENST00000543185 CD55P08174 381 aa16.02■□□□□ 0.15
HDAC4-215ENST00000543185 C4orf51C9J302 202 aa16.02■□□□□ 0.15
HDAC4-215ENST00000543185 TMEM14EPQ6UXP3 125 aa16.02■□□□□ 0.15
HDAC4-215ENST00000543185 ZNF664Q8N3J9 261 aa16.02■□□□□ 0.15
HDAC4-215ENST00000543185 H0YIZ8 118 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 RPL36AP83881 106 aaKnown RBP16.01■□□□□ 0.15
HDAC4-215ENST00000543185 LINC01545Q5VT33 79 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 RPL36ALQ969Q0 106 aaKnown RBP16.01■□□□□ 0.15
HDAC4-215ENST00000543185 TRAV8-3A0A0A6YYJ7 113 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 hDV102S1A0JD36 115 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 C17orf100A8MU93 164 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 WFDC1Q9HC57 220 aa16.01■□□□□ 0.15
HDAC4-215ENST00000543185 IGKV1D-13A0A0B4J2D9 117 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 TCRAP04437 139 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 IGKV1-13P0DP09 117 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 SAP25Q8TEE9 199 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 IGHV3-23P01764 117 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 C9orf139Q6ZV77 190 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 HAPLN4Q86UW8 402 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 NPIPB5A8MRT5 1133 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 NDUFS6O75380 124 aaKnown RBP16■□□□□ 0.15
HDAC4-215ENST00000543185 C1QTNF4Q9BXJ3 329 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 K7EP34 96 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 GATA2P23769 480 aaPredicted RBP16■□□□□ 0.15
HDAC4-215ENST00000543185 Q6ZS49 121 aa16■□□□□ 0.15
HDAC4-215ENST00000543185 OOSP1A8MZH6 123 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 PSG7Q13046 419 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 NMSQ5H8A3 153 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 TRBV6-6A0A0A6YYG2 114 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 HAX1O00165 279 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 IGHV3-64A0A075B6Q5 118 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 A0A087WX48 190 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 SPSB2Q99619 263 aa15.99■□□□□ 0.15
HDAC4-215ENST00000543185 IGHV2-70P01814 119 aa15.98■□□□□ 0.15
HDAC4-215ENST00000543185 SLC25A45Q8N413 288 aa15.98■□□□□ 0.15
HDAC4-215ENST00000543185 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-215ENST00000543185 IMMP1LQ96LU5 166 aa15.98■□□□□ 0.15
HDAC4-215ENST00000543185 K7EP13 123 aa15.98■□□□□ 0.15
HDAC4-215ENST00000543185 LILRA1O75019 489 aa15.98■□□□□ 0.15
HDAC4-215ENST00000543185 WBP1Q96G27 269 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 INSP01308 110 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 ZC2HC1BQ5TFG8 222 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 C15orf32Q32M92 178 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 LYZL1Q6UWQ5 148 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 RPP25LQ8N5L8 163 aaKnown RBP15.97■□□□□ 0.15
HDAC4-215ENST00000543185 SLAQ13239 276 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 TMEM256Q8N2U0 113 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 ANKHD1Q8IWZ3 2542 aaKnown RBP15.97■□□□□ 0.15
HDAC4-215ENST00000543185 HLA-DMBP28068 263 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 SUMO4Q6EEV6 95 aa15.97■□□□□ 0.15
HDAC4-215ENST00000543185 IL17RELQ6ZVW7 336 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 USMG5Q96IX5 58 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 SIVA1O15304 175 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 CSTL1Q9H114 145 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 ZNF319Q9P2F9 582 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 PMS2P5A8MQ11 134 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 TAL2Q16559 108 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 TMEM158Q8WZ71 300 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 GAGE12HA6NDE8 117 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 FAM216BQ8N7L0 139 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 A0A1B0GWJ7 208 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 SUPT4H1P63272 117 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms