RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 Q6ZRG5 221 aa13.6□□□□□ -0.23
COPS7A-216ENST00000543170 ATP5SQ99766 215 aa13.6□□□□□ -0.23
COPS7A-216ENST00000543170 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
COPS7A-216ENST00000543170 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
COPS7A-216ENST00000543170 COX7A2P2O60397 106 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 RPL7P18124 248 aaKnown RBP13.59□□□□□ -0.23
COPS7A-216ENST00000543170 B2MP61769 119 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 CLINT1Q14677 625 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 MIC13Q5XKP0 118 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 OR1L4Q8NGR5 311 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 UHRF2Q96PU4 802 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 PFDN5Q99471 154 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 WDR61Q9GZS3 305 aaKnown RBP13.59□□□□□ -0.23
COPS7A-216ENST00000543170 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 SLC39A9Q9NUM3 307 aa13.59□□□□□ -0.23
COPS7A-216ENST00000543170 UBE2CO00762 179 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 PSMB3P49720 205 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 ZNF124Q15973 351 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 LEMD1Q68G75 181 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 LINC00305Q7Z4B0 112 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 TMEM37Q8WXS4 190 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 PXMP4Q9Y6I8 212 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 STAB2Q8WWQ8 2551 aa13.58□□□□□ -0.24
COPS7A-216ENST00000543170 ISLRO14498 428 aa13.57□□□□□ -0.24
COPS7A-216ENST00000543170 ID1P41134 155 aa13.57□□□□□ -0.24
COPS7A-216ENST00000543170 PSMG4Q5JS54 123 aa13.57□□□□□ -0.24
COPS7A-216ENST00000543170 C10orf113Q5VZT2 155 aa13.57□□□□□ -0.24
COPS7A-216ENST00000543170 PARD6GQ9BYG4 376 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-216ENST00000543170 A0A087X0K7 114 aa13.56□□□□□ -0.24
COPS7A-216ENST00000543170 AQP10Q96PS8 301 aa13.56□□□□□ -0.24
COPS7A-216ENST00000543170 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
COPS7A-216ENST00000543170 TENM3Q9P273 2699 aa13.56□□□□□ -0.24
COPS7A-216ENST00000543170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 Q6ZWC4 215 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 STHQ8IWL8 128 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 GATAD1Q8WUU5 269 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 C17orf77Q96MU5 243 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 RSG1Q9BU20 258 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
COPS7A-216ENST00000543170 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
COPS7A-216ENST00000543170 MRPS12O15235 138 aaKnown RBP13.54□□□□□ -0.24
COPS7A-216ENST00000543170 IFNA5P01569 189 aa13.54□□□□□ -0.24
COPS7A-216ENST00000543170 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
COPS7A-216ENST00000543170 ATF4P18848 351 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-216ENST00000543170 CXCL2P19875 107 aa13.54□□□□□ -0.24
COPS7A-216ENST00000543170 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
COPS7A-216ENST00000543170 ZNF709Q8N972 641 aa13.54□□□□□ -0.24
COPS7A-216ENST00000543170 OR2T35Q8NGX2 323 aa13.54□□□□□ -0.24
COPS7A-216ENST00000543170 Q5BKY6 102 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 BPIFA4PQ86YQ2 179 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 C16orf92Q96LL3 132 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 WWC2-AS2Q96NR7 200 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 SMIM3Q9BZL3 60 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 CSTL1Q9H114 145 aa13.53□□□□□ -0.24
COPS7A-216ENST00000543170 AGRNO00468 2067 aa13.52□□□□□ -0.24
COPS7A-216ENST00000543170 SPP1P10451 314 aa13.52□□□□□ -0.25
COPS7A-216ENST00000543170 ZNF266Q14584 549 aa13.52□□□□□ -0.25
COPS7A-216ENST00000543170 MORN5Q5VZ52 161 aa13.52□□□□□ -0.25
COPS7A-216ENST00000543170 RETNQ9HD89 108 aa13.52□□□□□ -0.25
COPS7A-216ENST00000543170 KNCNA6PVL3 124 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 G3V3Q6 166 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 HLA-DRB4P13762 266 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 TMEM41BQ5BJD5 291 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 MORN3Q6PF18 240 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-216ENST00000543170 FOXI2Q6ZQN5 318 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 SAV1Q9H4B6 383 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-216ENST00000543170 WFDC1Q9HC57 220 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 TNFSF18Q9UNG2 199 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 HLA-DRB4X5D2U9 266 aa13.51□□□□□ -0.25
COPS7A-216ENST00000543170 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
COPS7A-216ENST00000543170 INO80EQ8NBZ0 244 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-216ENST00000543170 LINC00052Q96N35 136 aa13.5□□□□□ -0.25
COPS7A-216ENST00000543170 CLUHP3Q96NS8 147 aa13.5□□□□□ -0.25
COPS7A-216ENST00000543170 OVOL2Q9BRP0 275 aa13.5□□□□□ -0.25
COPS7A-216ENST00000543170 RPRMQ9NS64 109 aa13.5□□□□□ -0.25
COPS7A-216ENST00000543170 NBEAL2Q6ZNJ1 2754 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 DNAH7Q8WXX0 4024 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 FXYD6-FXYD2A0A087WZ82 144 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 TRAV8-2A0A0B4J237 113 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 RNF222A6NCQ9 220 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 H3BMM0 161 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 IGLC2P0DOY2 106 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 RNF183Q96D59 192 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 SLC50A1Q9BRV3 221 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
COPS7A-216ENST00000543170 HRH4Q9H3N8 390 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 TIMM9Q9Y5J7 89 aa13.49□□□□□ -0.25
COPS7A-216ENST00000543170 SPRY2O43597 315 aa13.48□□□□□ -0.25
COPS7A-216ENST00000543170 CA1P00915 261 aaPredicted RBP13.48□□□□□ -0.25
COPS7A-216ENST00000543170 GUK1Q16774 197 aa13.48□□□□□ -0.25
COPS7A-216ENST00000543170 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
COPS7A-216ENST00000543170 C20orf173Q96LM9 149 aa13.48□□□□□ -0.25
COPS7A-216ENST00000543170 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
COPS7A-216ENST00000543170 NUTF2P61970 127 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms