RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PDE6DO43924 150 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 GNG7O60262 68 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 YPEL1O60688 119 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 CGAP01215 116 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 CXCL1P09341 107 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SCGB1C2P0DMR2 95 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 AZU1P20160 251 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 CDK2P24941 298 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 PIGPP57054 158 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 FXYD6P3P58550 94 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 PFN3P60673 137 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 FUT5Q11128 374 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 PPP1R1AQ13522 171 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ELOCQ15369 112 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ARHGAP11BQ3KRB8 267 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM176BQ3YBM2 270 aaPredicted RBP2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 CCSMST1Q4G0I0 132 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 COMMD6Q7Z4G1 85 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ZIC4Q8N9L1 334 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 FER1L6-AS1Q8NA97 138 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5A2Q8NGI9 324 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 FAM57AQ8TBR7 257 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SCGB1C1Q8TD33 95 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC37A2Q8TED4 501 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 Q8WTZ3 238 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 KLK6Q92876 244 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ELSPBP1Q96BH3 223 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 MS4A6EQ96DS6 147 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 YPEL2Q96QA6 119 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC25A21Q9BQT8 299 aaPredicted RBP2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 GINS3Q9BRX5 216 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 TTTY10Q9BZA0 68 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 LINC00470Q9BZP3 86 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC35B3Q9H1N7 401 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 TAS2R8Q9NYW2 309 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNRD1Q9P1U0 126 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 UQCR10Q9UDW1 63 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 KIF25-AS1Q9Y6Z4 181 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 SPG11Q96JI7 2443 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 NUP210Q8TEM1 1887 aaPredicted RBP2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ZFHX3Q15911 3703 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 NINQ8N4C6 2090 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ITPR2Q14571 2701 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 IGHV3-49A0A0A0MS15 119 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A0D9SEW6 157 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 MEIS3P1A6NDR6 274 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 OR6C6A6NF89 314 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TLCD2A6NGC4 264 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 UMAD1C9J7I0 102 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 H7BYZ3 331 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 J3QLW9 94 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 LGALS9O00182 355 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 HMGN4O00479 90 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ARL6IP5O75915 188 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 MAS1P04201 325 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 CSN2P05814 226 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 MPC1LP0DKB6 136 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF823P16415 610 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 FAUP35544 74 aaKnown RBP2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 GABRA2P47869 451 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 SULT1A2P50226 295 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TCL1AP56279 114 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 SMIM11AP58511 58 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TAS2R41P59536 307 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 S100A10P60903 97 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 RUNX1Q01196 453 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 FMODQ06828 376 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 CDK5R1Q15078 307 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 BATFQ16520 125 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TDRG1Q3Y452 100 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 CENPWQ5EE01 88 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF684Q5T5D7 378 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 AADACL3Q5VUY0 350 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM42Q69YG0 159 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 SHISA6Q6ZSJ9 500 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 FA2HQ7L5A8 372 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 NEGR1Q7Z3B1 354 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 DOLPP1Q86YN1 238 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ORMDL3Q8N138 153 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 C5orf17Q8NAS9 161 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 OR4B1Q8NGF8 309 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5H2Q8NGV7 314 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 OR4X1Q8NH49 305 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 RPS4Y2Q8TD47 263 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 GPR119Q8TDV5 335 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 SKA2Q8WVK7 121 aaPredicted RBP2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TNFAIP8L1Q8WVP5 186 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC35G5Q96KT7 338 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 GPR82Q96P67 336 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 VAMP8Q9BV40 100 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TCEAL2Q9H3H9 227 aaPredicted RBP2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 HHLA2Q9UM44 414 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 FUT9Q9Y231 359 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM14AQ9Y6G1 99 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 DENND4CQ5VZ89 1909 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 MTCL1Q9Y4B5 1905 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms