RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 IL22RA2Q969J5 263 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 F6UB75 175 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 AKAIN1P0CW23 69 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 MEOX2P50222 304 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 CCR6P51684 374 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 GAMTQ14353 236 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 C16orf92Q96LL3 132 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 RBKSQ9H477 322 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 DOK5Q9P104 306 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 HSPB7Q9UBY9 170 aa10.91□□□□□ -0.66
RTN3-211ENST00000542238 LYRM1O43325 122 aa10.9□□□□□ -0.66
RTN3-211ENST00000542238 FAUP35544 74 aaKnown RBP10.9□□□□□ -0.66
RTN3-211ENST00000542238 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
RTN3-211ENST00000542238 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
RTN3-211ENST00000542238 PRRT1Q99946 306 aa10.9□□□□□ -0.66
RTN3-211ENST00000542238 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
RTN3-211ENST00000542238 IGKV1D-37A0A075B6S9 117 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 C1QBP02746 253 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 GALR1P47211 349 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 OR2F1Q13607 317 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 TOMM5Q8N4H5 51 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 MARVELD1Q9BSK0 173 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 ALG5Q9Y673 324 aa10.89□□□□□ -0.67
RTN3-211ENST00000542238 A0A0B4J2A0 478 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 FAM240BA0A1B0GVZ2 78 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 NAP1L6A6NFF2 107 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 LYRM9A8MSI8 78 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 TNP2Q05952 138 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 OR4C16Q8NGL9 310 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 OR1S1Q8NH92 325 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 SCGB3A2Q96PL1 93 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 TRGV9Q99603 122 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 SHPKQ9UHJ6 478 aa10.88□□□□□ -0.67
RTN3-211ENST00000542238 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 CFDP00746 253 aaPredicted RBP10.87□□□□□ -0.67
RTN3-211ENST00000542238 INSP01308 110 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 AKR1C4P17516 323 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 B2MP61769 119 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
RTN3-211ENST00000542238 RAB11AP62491 216 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 GGNBP1Q5YKI7 109 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 LYZL2Q7Z4W2 148 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 C6orf223Q8N319 242 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 OR51S1Q8NGJ8 323 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 RSG1Q9BU20 258 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 SLC25A22Q9H936 323 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 SCP2D1Q9UJQ7 156 aa10.87□□□□□ -0.67
RTN3-211ENST00000542238 PIGBOS1A0A0B4J2F0 54 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 A8MTW9 85 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 ZNF705GA8MUZ8 300 aaPredicted RBP10.86□□□□□ -0.67
RTN3-211ENST00000542238 F5H768 121 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
RTN3-211ENST00000542238 NUDT3O95989 172 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 ANXA3P12429 323 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 S100A7P31151 101 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 INPP1P49441 399 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 CCL18P55774 89 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 SRPXP78539 464 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 AMTNQ6UX39 209 aa10.86□□□□□ -0.67
RTN3-211ENST00000542238 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 OR1B1Q8NGR6 318 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 ZNRF2Q8NHG8 242 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 GPR82Q96P67 336 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 SLC25A21Q9BQT8 299 aaPredicted RBP10.85□□□□□ -0.67
RTN3-211ENST00000542238 SLC25A32Q9H2D1 315 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
RTN3-211ENST00000542238 ZNF98A6NK75 572 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 M0R2Z0 102 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 ATP5G1P05496 136 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 TSPOP30536 169 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 ATP5G3P48201 142 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
RTN3-211ENST00000542238 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 Q5BKY6 102 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
RTN3-211ENST00000542238 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
RTN3-211ENST00000542238 PRM2P04554 102 aa10.83□□□□□ -0.68
RTN3-211ENST00000542238 BPIFCQ8NFQ6 507 aa10.83□□□□□ -0.68
RTN3-211ENST00000542238 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 CBY3A6NI87 242 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 CRXO43186 299 aaPredicted RBP10.82□□□□□ -0.68
RTN3-211ENST00000542238 MED6O75586 246 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 IAPPP10997 89 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 ORM2P19652 201 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 RPP30P78346 268 aaKnown RBP10.82□□□□□ -0.68
RTN3-211ENST00000542238 CLINT1Q14677 625 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.82□□□□□ -0.68
RTN3-211ENST00000542238 HYLS1Q96M11 299 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms