RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 MIC13Q5XKP0 118 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 LINC00052Q96N35 136 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
YBX3-212ENST00000542002 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 FBXL17Q9UF56 701 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 PFDN2Q9UHV9 154 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 HIGD1AQ9Y241 93 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 TP53TG1Q9Y2A0 90 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 LYSTQ99698 3801 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 TRAV5A0A0B4J249 113 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 E5RGE8 158 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 H3BMM0 161 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 C3orf84H3BNL1 204 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 MRPS12O15235 138 aaKnown RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 MPC2O95563 127 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 CA1P00915 261 aaPredicted RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 SNRPCP09234 159 aaKnown RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 PRB4P10163 310 aaPredicted RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 C4BPBP20851 252 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 NUP62P37198 522 aaPredicted RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 CAMLGP49069 296 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 CYCSP99999 105 aaKnown RBP7.1□□□□□ -1.27
YBX3-212ENST00000542002 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 STHQ8IWL8 128 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 OR11H7Q8NGC8 314 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 ARV1Q9H2C2 271 aa7.1□□□□□ -1.27
YBX3-212ENST00000542002 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 UBE2L5PA0A1B0GUS4 154 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 F6UB75 175 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 RLN2P04090 185 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 LYL1P12980 280 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
YBX3-212ENST00000542002 FCN2Q15485 313 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 Q5BKY6 102 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 ZNF546Q86UE3 836 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 STX12Q86Y82 276 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 RNF182Q8N6D2 247 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 OR5C1Q8NGR4 320 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 THAP6Q8TBB0 222 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 CHAC2Q8WUX2 184 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 DNAJC4Q9NNZ3 241 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 CLEC5AQ9NY25 188 aa7.09□□□□□ -1.27
YBX3-212ENST00000542002 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.28
YBX3-212ENST00000542002 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
YBX3-212ENST00000542002 ISLRO14498 428 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 FGF7P21781 194 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 GALR1P47211 349 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 RPL29P47914 159 aaKnown RBP7.08□□□□□ -1.28
YBX3-212ENST00000542002 PSMB3P49720 205 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 RAP2BP61225 183 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 HBG1P69891 147 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 HBG2P69892 147 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 CLINT1Q14677 625 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 OPCMLQ14982 345 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 ATP6V1FQ16864 119 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 GCSAMLQ5JQS6 135 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 SLC25A31Q9H0C2 315 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 SAV1Q9H4B6 383 aaPredicted RBP7.08□□□□□ -1.28
YBX3-212ENST00000542002 WFDC1Q9HC57 220 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 SLC39A9Q9NUM3 307 aa7.08□□□□□ -1.28
YBX3-212ENST00000542002 H3BQ15 152 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 H3BTX0 84 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 DEFB4AO15263 64 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 ZNF705DP0CH99 300 aaPredicted RBP7.07□□□□□ -1.28
YBX3-212ENST00000542002 ZNF705BP0CI00 300 aaPredicted RBP7.07□□□□□ -1.28
YBX3-212ENST00000542002 HLA-DRB4P13762 266 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 ID1P41134 155 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 FXYD7P58549 80 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 BAXQ07812 192 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 FGL1Q08830 312 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 RAB31Q13636 194 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 OXA1LQ15070 435 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 PXDC1Q5TGL8 231 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 C10orf113Q5VZT2 155 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 ZNF709Q8N972 641 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 GPR82Q96P67 336 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 RARRES2Q99969 163 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 NPCDR1Q9BY65 106 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 MBD2Q9UBB5 411 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 RYR2Q92736 4967 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 AGRNO00468 2067 aa7.07□□□□□ -1.28
YBX3-212ENST00000542002 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
YBX3-212ENST00000542002 A0A087X0K7 114 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 A0A0J9YX75 114 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 COX7A2P2O60397 106 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 SPP1P10451 314 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 RPL7P18124 248 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms