RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 BOLA2-SMG1P6H3BVE0 249 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 AKAIN1P0CW23 69 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 TAS2R60P59551 318 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 RHOBP62745 196 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 S100A7AQ86SG5 101 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 ZNF738Q8NE65 137 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 BPIFCQ8NFQ6 507 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 RNF141Q8WVD5 230 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 TMEM147Q9BVK8 224 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 Q9H3A6 140 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 PAIP2BQ9ULR5 123 aaKnown RBP8.57□□□□□ -1.04
SNHG1-216ENST00000541416 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 CRXO43186 299 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-216ENST00000541416 HTN1P15515 57 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 FGL1Q08830 312 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 FAAP20Q6NZ36 180 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 TMEM144Q7Z5S9 345 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 BAP18Q8IXM2 172 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 GNPNAT1Q96EK6 184 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-216ENST00000541416 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 SCP2D1Q9UJQ7 156 aa8.56□□□□□ -1.04
SNHG1-216ENST00000541416 RGS5O15539 181 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 MED6O75586 246 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 PRM2P04554 102 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 ORM2P19652 201 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 OR5I1Q13606 314 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 FCN2Q15485 313 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 LYZL2Q7Z4W2 148 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 CIB3Q96Q77 187 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-216ENST00000541416 RABL2AQ9UBK7 228 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-216ENST00000541416 RABL2BQ9UNT1 228 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
SNHG1-216ENST00000541416 TRAV12-2A0A075B6T6 113 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 PLAC8L1A1L4L8 177 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 EREGO14944 169 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 RPL7P18124 248 aaKnown RBP8.54□□□□□ -1.04
SNHG1-216ENST00000541416 AZU1P20160 251 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 M6PRP20645 277 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 RAP2BP61225 183 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 HIST1H1AQ02539 215 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-216ENST00000541416 CLVS1Q8IUQ0 354 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-216ENST00000541416 CCDC28AQ8IWP9 274 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 OR51S1Q8NGJ8 323 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 RXFP4Q8TDU9 374 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 TMEM263Q8WUH6 116 aaKnown RBP8.54□□□□□ -1.04
SNHG1-216ENST00000541416 SMIM4Q8WVI0 70 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 UPK3BQ9BT76 320 aa8.54□□□□□ -1.04
SNHG1-216ENST00000541416 SLC25A39Q9BZJ4 359 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-216ENST00000541416 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 TRAV26-1A0A087WT03 109 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 H7BYZ3 331 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 AKR1C1Q04828 323 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 C20orf144Q9BQM9 153 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
SNHG1-216ENST00000541416 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
SNHG1-216ENST00000541416 H3BNG1 76 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 IAPPP10997 89 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 CDKN1BP46527 198 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 OR8A1Q8NGG7 326 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 MCUBQ9NWR8 336 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
SNHG1-216ENST00000541416 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.05
SNHG1-216ENST00000541416 TRAV8-2A0A0B4J237 113 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 SNURFLB1AK76 121 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 CTDSPLO15194 276 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 RLN2P04090 185 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 SLC25A6P12236 298 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 IL18Q14116 193 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
SNHG1-216ENST00000541416 UHRF2Q96PU4 802 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 HIGD1AQ9Y241 93 aa8.51□□□□□ -1.05
SNHG1-216ENST00000541416 H3BRN7 92 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 HYPMO75409 117 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 IL5P05113 134 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 DLK1P80370 383 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 PSG3Q16557 428 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 FRZBQ92765 325 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 C17orf77Q96MU5 243 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 ZNF586Q9NXT0 402 aa8.5□□□□□ -1.05
SNHG1-216ENST00000541416 A0A087X0K7 114 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 A0A0J9YY99 117 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 ANKRD20A5PA0PJZ0 165 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 ZNF701M0R085 212 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-216ENST00000541416 WRBO00258 174 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 SYNGR2O43760 224 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 PITX3O75364 302 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 OR5G3P0C626 314 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 CXCL3P19876 107 aa8.49□□□□□ -1.05
SNHG1-216ENST00000541416 GATA2P23769 480 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms