RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
CDCA3-208ENST00000540683 LINC00854A0A1B0GVQ3 168 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 H3BP45 60 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 ADAP1O75689 374 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 GIG44P09565 113 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-208ENST00000540683 OR5G3P0C626 314 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 SPART-AS1P0CW21 52 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 CXCL2P19875 107 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 ANXA7P20073 488 aaKnown RBP7.54□□□□□ -1.2
CDCA3-208ENST00000540683 C4BPBP20851 252 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 PLP1P60201 277 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 POLR2GP62487 172 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDCA3-208ENST00000540683 HBG1P69891 147 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 HBG2P69892 147 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 TMEM208Q9BTX3 173 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 RSG1Q9BU20 258 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 RNF126Q9BV68 326 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 DOK5Q9P104 306 aa7.54□□□□□ -1.2
CDCA3-208ENST00000540683 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 FAM240BA0A1B0GVZ2 78 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 C5orf51A6NDU8 294 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 IGLL5B9A064 214 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 DEDDO75618 318 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 HBE1P02100 147 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 TCRBP04435 133 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 LINC00869P0C866 280 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 HLA-DMBP28068 263 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 EWSR1Q01844 656 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 Q6ZRG5 221 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 STX12Q86Y82 276 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 C12orf45Q8N5I9 185 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 SHANK2-AS3Q9BTD1 123 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 WDR12Q9GZL7 423 aaKnown RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 GPN1Q9HCN4 374 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-208ENST00000540683 FLVCR2Q9UPI3 526 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 X6R8D5 127 aa7.53□□□□□ -1.2
CDCA3-208ENST00000540683 AGRNO00468 2067 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF705FA8MVS1 300 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-208ENST00000540683 H3BRN7 92 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 SOCS3O14543 225 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 DEFB4AO15263 64 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-208ENST00000540683 P0DMU3 169 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 BCAP31P51572 246 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 OXA1LQ15070 435 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 FAM78BQ5VT40 261 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 LCN15Q6UWW0 184 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 GSG1LQ6UXU4 331 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 TMEM256Q8N2U0 113 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-208ENST00000540683 PFDN5Q99471 154 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 SLC25A32Q9H2D1 315 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 NUDT15Q9NV35 164 aa7.52□□□□□ -1.21
CDCA3-208ENST00000540683 A0A087X0K7 114 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 FAM25EA8MYX2 175 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 COX7A2P2O60397 106 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 MPDU1O75352 247 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 INSP01308 110 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 RLN2P04090 185 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 H2AFB2P0C5Z0 115 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
CDCA3-208ENST00000540683 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 S100A11P31949 105 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 BTCP35070 178 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 CAV2P51636 162 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 FGL1Q08830 312 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
CDCA3-208ENST00000540683 GUK1Q16774 197 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF738Q8NE65 137 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 C2orf50Q96LR7 162 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 ARL6Q9H0F7 186 aa7.51□□□□□ -1.21
CDCA3-208ENST00000540683 IGKV3-20P01619 116 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-208ENST00000540683 TSPOP30536 169 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 RRAS2P62070 204 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-208ENST00000540683 CYCSP99999 105 aaKnown RBP7.5□□□□□ -1.21
CDCA3-208ENST00000540683 ATP6V1FQ16864 119 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 ENKURQ8TC29 256 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-208ENST00000540683 ARV1Q9H2C2 271 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 KCNIP2Q9NS61 270 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
CDCA3-208ENST00000540683 IGHV4-4A0A075B6R2 117 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms