RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 C9orf66Q5T8R8 295 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 DMRTA1Q5VZB9 504 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 TEX43Q6ZNM6 134 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 TBC1D26Q86UD7 250 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 ZBTB34Q8NCN2 500 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 OR4X1Q8NH49 305 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 ANAPC16Q96DE5 110 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 OR10C1Q96KK4 312 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 ATG101Q9BSB4 218 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 MCRIP2Q9BUT9 160 aaKnown RBP5.5□□□□□ -1.53
LMO3-220ENST00000539232 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 PEF1Q9UBV8 284 aaKnown RBP5.5□□□□□ -1.53
LMO3-220ENST00000539232 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 CSMD3Q7Z407 3707 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 IGLV11-55A0A075B6I3 123 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.49□□□□□ -1.53
LMO3-220ENST00000539232 IGHV3-35A0A0C4DH35 117 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 A0A0G2JRQ6 117 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 NPIPB5A8MRT5 1133 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 H3BUA1 57 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 HPRT1P00492 218 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 IGKV1-5P01602 117 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 CRYGCP07315 174 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 PFN1P07737 140 aaKnown RBP5.49□□□□□ -1.53
LMO3-220ENST00000539232 F2RP25116 425 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 KIR2DS2P43631 304 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SRPXP78539 464 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 ANKRD55Q3KP44 614 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SP6Q3SY56 376 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SPINK9Q5DT21 86 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 OR8G2PQ6IF36 304 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 FAM219AQ8IW50 185 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 Q8N1Y9 231 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 GBGT1Q8N5D6 347 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 OR4B1Q8NGF8 309 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 FAM213BQ8TBF2 198 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 CACNG8Q8WXS5 425 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SLC35E1Q96K37 410 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 TP53RKQ96S44 253 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SPIN2AQ99865 258 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SPIN2BQ9BPZ2 258 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 RTBDNQ9BSG5 229 aaPredicted RBP5.49□□□□□ -1.53
LMO3-220ENST00000539232 MAGT1Q9H0U3 335 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 RBKSQ9H477 322 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 SDF2L1Q9HCN8 221 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 BET1LQ9NYM9 111 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 HSPB7Q9UBY9 170 aa5.49□□□□□ -1.53
LMO3-220ENST00000539232 ZNF256Q9Y2P7 627 aaPredicted RBP5.49□□□□□ -1.53
LMO3-220ENST00000539232 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
LMO3-220ENST00000539232 TRAV9-1A0A075B6T8 112 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 IGHV3OR16-8A0A075B7F1 116 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 LOC102723971A0A1B0GUV8 181 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 DUXBA0A1W2PPF3 345 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 MAP1LC3B2A6NCE7 125 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 CRYM-AS1A6NIL9 109 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 ZNF727A8MUV8 499 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 F6UZH7 168 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 F8W735 103 aaPredicted RBP5.48□□□□□ -1.53
LMO3-220ENST00000539232 ST8SIA3O43173 380 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 ACTL6BO94805 426 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 CDS2O95674 445 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 HRASP01112 189 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 IGLV1-51P01701 117 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 P0C879 139 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 ESDP10768 282 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 UCP1P25874 307 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 UCP3P55916 312 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 UBE2G2P60604 165 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 VAMP2P63027 116 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 CATR1Q13166 79 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 OR5I1Q13606 314 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 KLK9Q2XQG4 91 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 PDZD11Q5EBL8 140 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 ACTL10Q5JWF8 245 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 KCNIP4Q6PIL6 250 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 SPSB3Q6PJ21 355 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 CLEC19AQ6UXS0 136 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 UNQ9165/PRO28630Q6UXU0 137 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 Q6ZRM9 215 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 LINC01551Q86U37 167 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 NECAP1Q8NC96 275 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 OR9G4Q8NGQ1 327 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 USMG5Q96IX5 58 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 HINT2Q9BX68 163 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 MAP1LC3BQ9GZQ8 125 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 DNAJC4Q9NNZ3 241 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 NDUFA4L2Q9NRX3 87 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 GSKIPQ9P0R6 139 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 NAT8Q9UHE5 227 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 KLK9Q9UKQ9 250 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 TNCP24821 2201 aa5.48□□□□□ -1.53
LMO3-220ENST00000539232 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 A0A0G2JLM5 398 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 FAM223BA6NKX1 122 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 IGHV3-48P01763 117 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 GP9P14770 177 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 RPL29P47914 159 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms