RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 LGALS9O00182 355 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 ATF4P18848 351 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-207ENST00000539047 PEA15Q15121 130 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 FAM210AQ96ND0 272 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 TMEM14CQ9P0S9 112 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 PEMTQ9UBM1 199 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 CUBNO60494 3623 aa11.83□□□□□ -0.52
VAMP1-207ENST00000539047 TRAV5A0A0B4J249 113 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 RBFOX3A6NFN3 312 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 ZNF207O43670 478 aaKnown RBP11.82□□□□□ -0.52
VAMP1-207ENST00000539047 EIF3GO75821 320 aaKnown RBP eCLIP11.82□□□□□ -0.52
VAMP1-207ENST00000539047 BCL2P10415 239 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 CRYBB3P26998 211 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 GALR1P47211 349 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 GUK1Q16774 197 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 HAGHQ16775 308 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 TOR2AQ5JU69 321 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 MORN5Q5VZ52 161 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 UQCC3Q6UW78 93 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 ARL2-SNX15V9GYD0 113 aa11.82□□□□□ -0.52
VAMP1-207ENST00000539047 A8MWP6 167 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 OR10J4P0C629 311 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 PMS2P11Q13670 270 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 AWAT1Q58HT5 328 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 UNQ9165/PRO28630Q6UXU0 137 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 TXNDC17Q9BRA2 123 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 TREM1Q9NP99 234 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
VAMP1-207ENST00000539047 IGHV7-4-1A0A0J9YVY3 117 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 CCL24O00175 119 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 PYYP10082 97 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 GP9P14770 177 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 MEOX2P50222 304 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 CCL20P78556 96 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 NSUN5P1Q3KNT7 163 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 C18orf65Q6ZTR6 163 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 CITED4Q96RK1 184 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 NKX6-2Q9C056 277 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-207ENST00000539047 TMPRSS5Q9H3S3 457 aa11.8□□□□□ -0.52
VAMP1-207ENST00000539047 LOC102723971A0A1B0GUV8 181 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 HELTA6NFD8 242 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 BUB3O43684 328 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
VAMP1-207ENST00000539047 SLURP1P55000 103 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 UBE2G2P60604 165 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 ZNF506Q5JVG8 444 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
VAMP1-207ENST00000539047 BLNKQ8WV28 456 aa11.79□□□□□ -0.52
VAMP1-207ENST00000539047 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 ZNF785A8K8V0 405 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 PAGE4O60829 102 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 PF4P02776 101 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 NBEAP1P0C6P0 100 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 MYCNOSP40205 109 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 MEF2BQ02080 365 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-207ENST00000539047 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-207ENST00000539047 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 SIGLEC15Q6ZMC9 328 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 SLC7A5P1Q8MH63 180 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 SUN5Q8TC36 379 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 ZNF414Q96IQ9 312 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 RAX2Q96IS3 184 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 U3KQE9 123 aa11.78□□□□□ -0.52
VAMP1-207ENST00000539047 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 CD5P06127 495 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 FHL3Q13643 280 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 PDE6HQ13956 83 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 RXFP4Q8TDU9 374 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 ZNF503Q96F45 646 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 DUX3Q96PT4 197 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 AAMDCQ9H7C9 122 aa11.77□□□□□ -0.53
VAMP1-207ENST00000539047 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 F6UZH7 168 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 PDE6DO43924 150 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
VAMP1-207ENST00000539047 PSG9Q00887 426 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
VAMP1-207ENST00000539047 TRBV19A0A075B6N1 114 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 A0A087X0K7 114 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms