RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 F5H768 121 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 ATP5LO75964 103 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 RNASE2P10153 161 aaKnown RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 SUPT4H1P63272 117 aaKnown RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 SPRNQ5BIV9 151 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 ZNF562Q6V9R5 426 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 ZNF833PQ6ZTB9 187 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 ETV2O00321 342 aaPredicted RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 PMCHL1Q16048 86 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 LOC102724200A0A096LPH7 203 aaPredicted RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 CXorf65A6NEN9 183 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 SNAI2O43623 268 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 SH2D1AO60880 128 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 LHFPL1Q86WI0 220 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 PHLDA1Q8WV24 401 aaPredicted RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 MCRIP2Q9BUT9 160 aaKnown RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 PRORYQ9H606 182 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 RFNGQ9Y644 331 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 CNOT1A5YKK6 2376 aaKnown RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 DAD1P61803 113 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 TCTEX1D4Q5JR98 221 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 C1QL4Q86Z23 238 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 FAM19A2Q8N3H0 131 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 LINC00477Q96M19 166 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 MPDZO75970 2070 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 SPTBN2O15020 2390 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 A0A0G2JRQ6 117 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 IGHV4-38-2P0DP08 117 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 MMP23AO75900 390 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 RPLP1P05386 114 aaKnown RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 PKIAP61925 76 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 SRSF1Q07955 248 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRP6-203ENST00000538239 SPINK13Q1W4C9 94 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 OCC1Q8TAD7 63 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 IFT22Q9H7X7 185 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 KLK9Q9UKQ9 250 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 NCOR1O75376 2440 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 TRBV7-9A0A0J9YWB2 115 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 DKK1O94907 266 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 DNAL4O96015 105 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 APOC4P55056 127 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 NMSQ5H8A3 153 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 INTS1Q8N201 2190 aaKnown RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 ZNF318Q5VUA4 2279 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 A0A087WWL8 130 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 KNCNA6PVL3 124 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 F2Z2F3 143 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 IGHV2-70P01814 119 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 MST1LQ2TV78 715 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 TMEM95Q3KNT9 176 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 FAM186AA6NE01 2351 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 NCR2O95944 276 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 IGHV4-39P01824 125 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 SRSF3P84103 164 aaKnown RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 PSG3Q16557 428 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 ZNF876PQ49A33 203 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 NUDT10Q8NFP7 164 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 NUDT11Q96G61 164 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 PRO3102Q9H379 93 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 VPREB3Q9UKI3 123 aa4.31□□□□□ -1.72
LRP6-203ENST00000538239 TSSC4Q9Y5U2 329 aaPredicted RBP4.31□□□□□ -1.72
LRP6-203ENST00000538239 PLXNB3Q9ULL4 1909 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 C22orf46C9J442 243 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 STAG3L2P0CL84 134 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 ADMP35318 185 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 DEFB136Q30KP8 78 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 ST6GALNAC6Q969X2 333 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 IGHV3-16A0A0C4DH30 117 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 IGKV1-6A0A0C4DH72 117 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 C15orf62A8K5M9 175 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 TCRAP04437 139 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 SRSF8Q9BRL6 282 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 RBMY1BA6NDE4 496 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 RBMY1EA6NEQ0 496 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 RBMY1DP0C7P1 496 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 RBMY1A1P0DJD3 496 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 RBMY1CP0DJD4 496 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 CKS1BP61024 79 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 LMO1P25800 156 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 DIDO1Q9BTC0 2240 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 TRAV8-1A0A0A6YYK1 113 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 IFITM2Q01629 132 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 SPOCK3Q9BQ16 436 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 TRAV12-2A0A075B6T6 113 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 LINC00469Q8N7U9 141 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 NRN1Q9NPD7 142 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 CTSZQ9UBR2 303 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 SCGB1A1P11684 91 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 TDGF1P3P51864 188 aa4.3□□□□□ -1.72
LRP6-203ENST00000538239 ERASQ7Z444 233 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms