RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HBG1P69891 147 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 HBG2P69892 147 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 TOR2AQ5JU69 321 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 SPATA31B1PQ5VZV4 182 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 ZNF546Q86UE3 836 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 SBSPONQ8IVN8 264 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 STXBP6Q8NFX7 210 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 PXMP4Q9Y6I8 212 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 FXYD6-FXYD2A0A087WZ82 144 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 TRAV5A0A0B4J249 113 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 A8MZ25 164 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 OR11H12B2RN74 326 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 ATP6V1FQ16864 119 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
CHFR-216ENST00000538235 SIGLEC15Q6ZMC9 328 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 ARV1Q9H2C2 271 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 SLC25A22Q9H936 323 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 SLC39A9Q9NUM3 307 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 PFDN2Q9UHV9 154 aa9.69□□□□□ -0.86
CHFR-216ENST00000538235 A0A1W2PS18 150 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 FABP1P07148 127 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
CHFR-216ENST00000538235 OR5G3P0C626 314 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 RPL29P47914 159 aaKnown RBP9.68□□□□□ -0.86
CHFR-216ENST00000538235 SELENOTP62341 195 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 RETNQ9HD89 108 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 NBEAL2Q6ZNJ1 2754 aa9.68□□□□□ -0.86
CHFR-216ENST00000538235 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 HYPMO75409 117 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 HLA-DMBP28068 263 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 DEFB131AP59861 70 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 B2MP61769 119 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 IGFL4Q6B9Z1 124 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 COMMD7Q86VX2 200 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 TMEM231Q9H6L2 316 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 ZMAT5Q9UDW3 170 aaKnown RBP9.67□□□□□ -0.86
CHFR-216ENST00000538235 STAB2Q8WWQ8 2551 aa9.67□□□□□ -0.86
CHFR-216ENST00000538235 DNAH7Q8WXX0 4024 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 TRAV2A0A0B4J234 112 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 H3BTX0 84 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 ARPC5O15511 151 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 CFDP00746 253 aaPredicted RBP9.66□□□□□ -0.86
CHFR-216ENST00000538235 CXCL2P19875 107 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
CHFR-216ENST00000538235 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 LINC00305Q7Z4B0 112 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 SH3BGRL3Q9H299 93 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
CHFR-216ENST00000538235 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 SLC17A3O00476 420 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 COX7A2P2O60397 106 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 HAGHQ16775 308 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
CHFR-216ENST00000538235 MIR17HGQ75NE6 70 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 OR8I2Q8N0Y5 310 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 GRAMD2BQ96HH9 432 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 FAM167A-AS1Q96KT0 104 aa9.65□□□□□ -0.86
CHFR-216ENST00000538235 PARD6GQ9BYG4 376 aaPredicted RBP9.65□□□□□ -0.86
CHFR-216ENST00000538235 SEPSECSQ9HD40 501 aaKnown RBP9.65□□□□□ -0.86
CHFR-216ENST00000538235 HELTA6NFD8 242 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 H3BQ15 152 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 MPDU1O75352 247 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 BMI1P35226 326 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 NUP62P37198 522 aaPredicted RBP9.64□□□□□ -0.87
CHFR-216ENST00000538235 RAB2AP61019 212 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 FGL1Q08830 312 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
CHFR-216ENST00000538235 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
CHFR-216ENST00000538235 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
CHFR-216ENST00000538235 A0A087X0K7 114 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 F6UB75 175 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 DNASE2O00115 360 aaPredicted RBP9.63□□□□□ -0.87
CHFR-216ENST00000538235 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
CHFR-216ENST00000538235 PYYP10082 97 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
CHFR-216ENST00000538235 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 S100A12P80511 92 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms