RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 NOTCH3Q9UM47 2321 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 AMY1AP04745 511 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 TAS2R60P59551 318 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 REC114Q7Z4M0 266 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 Q8N2B8 174 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 OR5AU1Q8NGC0 362 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 Q8WTZ3 238 aa9.31□□□□□ -0.92
CLIP1-208ENST00000537004 ELOA3CA0A087WX78 387 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-208ENST00000537004 K7EIM0 57 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 RD3LP0DJH9 198 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 Q8N9W7 124 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 OR1B1Q8NGR6 318 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 PRSS22Q9GZN4 317 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 CTDSP1Q9GZU7 261 aa9.3□□□□□ -0.92
CLIP1-208ENST00000537004 IFITM10A6NMD0 228 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 ORM2P19652 201 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
CLIP1-208ENST00000537004 LINC00305Q7Z4B0 112 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
CLIP1-208ENST00000537004 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 A0A1B0GV90 55 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 CD28P10747 220 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 RAB4BP61018 213 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 PKIAP61925 76 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 LINC01551Q86U37 167 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 TTC9CQ8N5M4 171 aa9.29□□□□□ -0.92
CLIP1-208ENST00000537004 FAM110DQ8TAY7 271 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-208ENST00000537004 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 A0A1W2PRE2 83 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 M0QZ24 198 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 HYPMO75409 117 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 HLA-DRB1P01911 266 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 CXCL1P09341 107 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 PYYP10082 97 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 PLP1P60201 277 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 OR5T1Q8NG75 326 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
CLIP1-208ENST00000537004 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 PGPEP1LA6NFU8 196 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 GGTLC3B5MD39 225 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 PSG1P11464 419 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 RPS10P46783 165 aaKnown RBP9.27□□□□□ -0.92
CLIP1-208ENST00000537004 NDUFA6P56556 154 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 TIGITQ495A1 244 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 FANCD2OSQ96PS1 177 aa9.27□□□□□ -0.92
CLIP1-208ENST00000537004 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.92
CLIP1-208ENST00000537004 H7BYZ3 331 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 IGKV1-17P01599 117 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 EGR2P11161 476 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-208ENST00000537004 DDTP30046 118 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 WIPF2Q8TF74 440 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-208ENST00000537004 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 HSPB9Q9BQS6 159 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 C2orf88Q9BSF0 95 aa9.27□□□□□ -0.93
CLIP1-208ENST00000537004 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
CLIP1-208ENST00000537004 NSUN5P1Q3KNT7 163 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 FXYD5Q96DB9 178 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-208ENST00000537004 TGP01266 2768 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 CRYBB3P26998 211 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 LYZP61626 148 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 OR10D4PQ8NGN7 298 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 LINC00527Q9UJ94 153 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 HIGD1AQ9Y241 93 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 MOB4Q9Y3A3 225 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 S4R3C0 116 aa9.26□□□□□ -0.93
CLIP1-208ENST00000537004 LINC01548A6NM66 108 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 C9JCJ5 164 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 TCTEX1D4Q5JR98 221 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 C5orf56Q8N8D9 126 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 NECAP1Q8NC96 275 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 OCC1Q8TAD7 63 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 FAM210BQ96KR6 192 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 NOL4LQ96MY1 436 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-208ENST00000537004 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 THYN1Q9P016 225 aa9.25□□□□□ -0.93
CLIP1-208ENST00000537004 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 A0A1W2PRX2 142 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 HELTA6NFD8 242 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 GNG7O60262 68 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 GALR1P47211 349 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 MFAP4P55083 255 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 CDPF1Q6NVV7 123 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 OR5B12Q96R08 314 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
CLIP1-208ENST00000537004 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms